Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g01906 ATGGAAGATACATTTGTTCCGTTTCGTGGAATTAAAAATGATCTTCAAGGGAGATTGATGTGTTACAAGCAAGATTGGATTGGTGGTCTTAGAGCAGGCTTCAGGATATTAGCCCCGACCACGTATATATTTTTTGCATCAGCAATTCCTGTTATTTCGTTTGGAGAACAATTGGAAAGAGACACAGATGGAGTACTTACTGCAGTTCAAACTTTAGCATCTACTGCATTGTGTGGAATTATACAGTCTATTATAGGAGGCCAACCCTTACTGATTCTTGGAGTAGCAGAACCAACTGTAATTATGTATACATTCATGTTCAACTTTGCGAAAAGAAGGCCAGAATTGGGTTCAAAACTCTTTCTAGCATGGACTGGATGGGTATGCATGTGGACTGCCATCTTGTTGTTCCTATTGGCTATCTTGGGAGCTTGCTCCATCATCAACAGGTTCACTCGCCTTGCAGGGGAACTGTTTGGTCTTCTTATTGCAATGCTTTTTATGCAAGAGGCTATTAAAGGACTCATCCATGAGTTTCACATACCTGAGAGAGCAAACCCATCATCACCAGAGTTTCAATCTTCATGGAGATTTGGAAATGGCATGTTTTCTTTGGTTCTGTCATTTGGCCTCCTGCTTACAGCATTGAAAAGCCGAAAGGCAAGGTCTTGGCGATATGGATCAGGATGTTTACGAGGCTTCATAGCAGATTATGGTGTCCCATTGATGGTTCTAGTATGGACTGCCATTTCTTATATTCCAGCTGGAAGTATTCCAAAAGGAGTTCCTAGGCGTCTTTTCAGCCCAAATCCATGGTCCTCTGGTGCATTTGAAAACTGGACTGTCATAAAGGATATGCTGAATGTACCAGTTCTCTATATTATTGGAGCATTTATTCCAGCAACAATGATTGCTGTTCTATATTATTTCGACCATAGTGTGGCATCTCAGCTTGCTCAGCAGAAAGAATTCAATTTAAGAAAGCCACCTTCTTTCCATTATGATTTACTTCTATTGGGCTTCATGGTTATAATATGTGGTCTAATTGGAATTCCTCCGTCCAACGGTGTTATTCCACAATCTCCAATGCATACCAAAAGTTTAGCAACATTGAAGCATCAGTTACTTAGGAATCGGCTTGTTGCTGCAGCACGAAGTTCTATGAGAAAACTAGAAAGTTTGGGACAAGTATATGGAAGTATGCAAGATGCTTACTGGCAGATGCAAACCCCTCTAGTTCACGAGGAATCTTCCTCACAGGGACTTAAAGAGTTGAAAGAGTCAACAATTCAATTGGCATCAAGCATGGGGAGTATAAATGCCCCAGTTGACGAATCAATATTTGATGTCAAGAAGGAAATTGATGACTTGTTGCCTGTTGAGGTCAAAGAGCAACGAGTGAGCAACCTGCTCCAGTCTGTGATGGTAGTTGGATGTGTAGCAGCAATGCCTTTCCTGAAAATGATTCCAACTTCTGTGCTATGGGGTTATTTTGCTTTCATGGCCATTGAAAACTTACCTGGAAACCAGTTCTGGGAACGGATTTTATTAATTTTAACTGCTCCAAGCAGAAGATACAAAGTTCTGGAGGAGTGCCATGCAACTTATGTGGAAACCGTTCCATTCAAGACAATTGCAGTGTTTACAGTGTTCCAGACTGCTTACTTGCTTGTTTGTTTTGGTATCACTTGGATTCCAACAGCTGGTGTTCTATTCCCATTGATGATCATGTTTCTGGTCCCTGTAAGGCAATACATTCTGCCCAAGTTTTTCAAAGGAGCACACCTTCAAGACTTAGATGCTGCAGAATATGAAGAAGTACCTGCTTTACCATTCAGCCTAGCTGCTGAAGGGGACTTGAGCAAGACAGCTTCCTTTGCAGATGATGGAGAGATTGTAGATGGAATAATCACCAGAAGCAGGGGTGAGATAAGACATGTTTGCAGTCCTAAGTTAATGAACTCCACTCCAATCATATCCCAAGAGTTAACCACTCTTCAAAGTCCAAGGTTACCAGATAAGGTATAA 2028 0.4132 MEDTFVPFRGIKNDLQGRLMCYKQDWIGGLRAGFRILAPTTYIFFASAIPVISFGEQLERDTDGVLTAVQTLASTALCGIIQSIIGGQPLLILGVAEPTVIMYTFMFNFAKRRPELGSKLFLAWTGWVCMWTAILLFLLAILGACSIINRFTRLAGELFGLLIAMLFMQEAIKGLIHEFHIPERANPSSPEFQSSWRFGNGMFSLVLSFGLLLTALKSRKARSWRYGSGCLRGFIADYGVPLMVLVWTAISYIPAGSIPKGVPRRLFSPNPWSSGAFENWTVIKDMLNVPVLYIIGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPPSFHYDLLLLGFMVIICGLIGIPPSNGVIPQSPMHTKSLATLKHQLLRNRLVAAARSSMRKLESLGQVYGSMQDAYWQMQTPLVHEESSSQGLKELKESTIQLASSMGSINAPVDESIFDVKKEIDDLLPVEVKEQRVSNLLQSVMVVGCVAAMPFLKMIPTSVLWGYFAFMAIENLPGNQFWERILLILTAPSRRYKVLEECHATYVETVPFKTIAVFTVFQTAYLLVCFGITWIPTAGVLFPLMIMFLVPVRQYILPKFFKGAHLQDLDAAEYEEVPALPFSLAAEGDLSKTASFADDGEIVDGIITRSRGEIRHVCSPKLMNSTPIISQELTTLQSPRLPDKV 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g01906 675 PANTHER ANION EXCHANGE PROTEIN 2 608 IPR003020 GO:0005452|GO:0006820|GO:0016020
Viun6g01906 675 Pfam HCO3- transporter family 201 373 IPR011531 GO:0006820|GO:0016020
Viun6g01906 675 Pfam HCO3- transporter family 7 180 IPR011531 GO:0006820|GO:0016020
Viun6g01906 675 Pfam HCO3- transporter family 460 550 IPR011531 GO:0006820|GO:0016020
Viun6g01906 675 Gene3D Helical hairpin bin 18 60 - -
Viun6g01906 675 FunFam probable boron transporter 2 18 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g01906 Viun-Chr6 25987741 25993326 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g01906 1 673 Antiporters AT3G62270 77.663 0.0 1092
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g01906 K24194 - gmx:100795777 1246.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun6g01906 6 25987741 25993326 Viun6g01906 6 25987741 25993326 ECH