Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g01864 ATGTCCTCCTCTCTCATGCCAAACCCAACCGATCGCACGCGTGACTCTCACCGCCCAAAGAAGAAGAAATCCCCCGCCAAGCCCCAACCCCACGCCAGATGGAAAACCCACGCGCAGCAGAACCTCTATTCCTCCAAGCTCCGCCAGGCAATCGCGCGTGTCAACATCTCCGCCGACGCGCCCCGCCGTGGCAGGGCCGTCCGCGAGGCCGCCGACAGAGTCCTCGCCGTCGCCGCCCGCGGGAGGACGCGCTGGAGCCGCGCCATCCTCACCAACCGCCTCAAGCTCAAGTTCAGGAAGACACCGCACAGGCGACACAAGGTGGCGCTCGGCCCGCCCCGCCCCAAGAAGCCCCGCTTCAGCGTCCTCCGCCTCAAGGGAAAAACCCTTCCCGCCGTTCAGCGCAGAGTTAGAGTCCTCGGCCGGTTGGTTCCCGGTTGCAGAAAAGAGCCGCTCCCGATCATTCTCGAAGAGGCCATCGATTACATACCCGCGCTCGAGATGCAGGTTCGCGCCATGGCGGATCTCGCTCAATTACTCCTCGGCTCCTCCTCTTCCTCTTCCTCTTCCTCCGCCGCCGCCGCATCCACCTCCGCGCCGCCGAGTTGA 609 0.6502 MSSSLMPNPTDRTRDSHRPKKKKSPAKPQPHARWKTHAQQNLYSSKLRQAIARVNISADAPRRGRAVREAADRVLAVAARGRTRWSRAILTNRLKLKFRKTPHRRHKVALGPPRPKKPRFSVLRLKGKTLPAVQRRVRVLGRLVPGCRKEPLPIILEEAIDYIPALEMQVRAMADLAQLLLGSSSSSSSSSAAAASTSAPPS 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g01864 202 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 36 184 IPR044660 GO:0006355
Viun6g01864 202 MobiDBLite consensus disorder prediction 1 39 - -
Viun6g01864 202 MobiDBLite consensus disorder prediction 16 30 - -
Viun6g01864 202 CDD bHLH_AtIBH1_like 122 173 IPR044549 GO:0006355
Viun6g01864 202 MobiDBLite consensus disorder prediction 183 202 - -
Viun6g01864 202 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 136 181 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g01864 Viun-Chr6 25696528 25697699 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g01864 31 180 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06590 56.213 9.80e-51 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g01864 - - gmx:100792237 274.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun6g01864 6 25696528 25697699 Viun6g01864 6 25696528 25697699 ECH
Viun3g05629 3 61970164 61971135 Viun6g01864 6 25696528 25697699 PCT