Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g01843 ATGGTTGACCGTACAAGGAGCAAGATTCTTATAAGAGAATATAACGAAGATAAAGATGTTAAAATGGTGAGAAAACTAGAGAGGAACTCTGAGATTGGAGCTAAAAAGGTGGTCTCCATTTTTACCAACATGATGGGTGACCCTTTATCTAGGATTAGGTTTTTCCCTCTTCGTGTAATGCTGGTAGCTGAGCTTCTAGAGAGCAAGGAACTAGTTGGAGTGGTTAGAGGAGTCATTAAGAATGTAGGGACTCTTTCTGGGTCACTCTTGAAGATGGGTTACATCCTAGGCCTCAGAGTCTCTCCTTCTTACAGGAGAAAGGGGGTTGCACTGAGACTTATTGCTGCAGTTGAAGAATGGATGGTGAGAAATGGAGCTGAGTATGCATTCCTAGCCACTGAAAAGGACAATGATGCTTCCAAAAACCTATTCACAATCAAATGCAATTATGTGAACCTAAGCTCACTTGTCATATTTGTCCAACCAATTAGTTCCATCACAAAGCACATTTCCAGGGACATAAAAATAGAGAAAGTGGACATAGATCTAGCAATTTCGTTATACAGAAGAACCTTGAAAACCAAAGATTTGTATCCACTAGACATGGACGTTATTCTGAAGGAGAAACTCAGCGTAGGCACATGGGTAAGTTATTATAAGAGGGAGGGCTGGCTCAATTTGCGAAGCAAGGTAGATAATGAAGAAGATCTCATTAGCAGTGAAACTTCAAACTCATCATGGGTAATTTTTAGTATTTGGAACACTTGTGAAGCTTACAAGCTTCAAATCAGAAGGTCTCAACTAGTAAGGTTTCTTCTTACAACCTTAAATCATGCAAGAGAGAGAGTTTTCCCTTGTCTCAAAATGTCGGTGAGTAACTCACTTTGTAGATCCTTTGGTTTCCTCTTTCTTTATGGAATCTATGGACAGGGAGAGAACCTTGGAGAGCTCATGGAATCTATGTGGAGATTCACATCAAGAGTGGGAGAAGGAATGAGGGACTGTAAGGTGTTTATAACTGAGTTAGGGTTTGGTGATCCACTTGCCAACCATGTTCCTCAAACAGATTCCATCTCGTGTATCGATGATCTATGGTACACAAAGAGACTTTCAACCCACGTTGATGAAAACATTGATGAAATATTGATGAGACAAGTGGGAAATGTGTTTGTTGACCCTAGAGATTTTTAG 1191 0.4013 MVDRTRSKILIREYNEDKDVKMVRKLERNSEIGAKKVVSIFTNMMGDPLSRIRFFPLRVMLVAELLESKELVGVVRGVIKNVGTLSGSLLKMGYILGLRVSPSYRRKGVALRLIAAVEEWMVRNGAEYAFLATEKDNDASKNLFTIKCNYVNLSSLVIFVQPISSITKHISRDIKIEKVDIDLAISLYRRTLKTKDLYPLDMDVILKEKLSVGTWVSYYKREGWLNLRSKVDNEEDLISSETSNSSWVIFSIWNTCEAYKLQIRRSQLVRFLLTTLNHARERVFPCLKMSVSNSLCRSFGFLFLYGIYGQGENLGELMESMWRFTSRVGEGMRDCKVFITELGFGDPLANHVPQTDSISCIDDLWYTKRLSTHVDENIDEILMRQVGNVFVDPRDF 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g01843 396 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 9 211 IPR000182 GO:0016747
Viun6g01843 396 CDD NAT_SF 60 131 - -
Viun6g01843 396 Pfam Acetyltransferase (GNAT) family 62 149 IPR000182 GO:0016747
Viun6g01843 396 Gene3D - 13 163 - -
Viun6g01843 396 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 6 396 - -
Viun6g01843 396 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 7 144 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g01843 Viun-Chr6 25568805 25570912 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Viun6g01843 Acetyltransf_1 3.4e-14 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g01843 - - vra:106754018 752.281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun6g01843 6 25568805 25570912 Viun6g01843 6 25568805 25570912 ECH
Viun3g05652 3 62104914 62106526 Viun6g01843 6 25568805 25570912 PCT