Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g01842 ATGGCGTTTTGGTGGCTCTTGCTCGTTCTGGCATTGGCTTTCGTCATCTGCAAGTTCCTTCTCATTCTCATTCCTCCCAAGGTTCCTTCCATTCACGTCGACTCCTCTGACGTGTTGGATGATGGGAATCAAACACAAGAGAACGGATTCATATATGTGCCTCCAAGGGGAACGGCACAGCAATCGAACGGGAAAGTTCAGTGCTATGAACCTGCTACCATGAAATATTTGGGATATGTTCCTGCATTAATGCCCGATGAGGTAAGGGAGCAAGTAGAGAAAGTACGGGAGGCACAAAAGATGTGGGCGAAGACGAGCTTCAAACAAAGGCGCCAGTTTTTGCGTATACTTTTGAAGTATATAATTAAACATCAAGAACTTATATGCGAAATATCTTCACGTGATACTGGGAAGACAATGGTAGATGCCTCTTTTGGGGAAATAATGACAACGTGTGAGAAGATAAATTGGCTGCTGTCTGAGGGTGAGCAATGCCTAAAGCCTGAGTACCGATCCTCTGGAAGAGCGATGTTTCATAAGAGAGCTAGAGTAGAATTACATCCCCTTGGTGTTATTGGTGCCATTGTGTCGTGGAACTATCCTTTCCACAACATTTTTAACCCTATGTTGGCAGCAGTTTTTTCTGGAAATGGCATTGTGATTAAGGTTTCAGAACATGCAAGTTGGTCTGGATGCTTTTACTTCCGAATCATCCAATCAGCCCTTGCTGCTATAGGAGCTCCAGAGGACCTTGTTGAGGTGATAACAGGGTTTGCTGAAACAGGAGAAGCACTGGTGTCTTCTGTTGACAAAGTCATTTTTGTTGGATCACCTGGGATAGGCAAGATGATAATGAGCAATGCTGCCGAGAAACTTATACCAGTTACACTGGAGCTTGGTGGAAAAGATGCATTTATTGTTTGTGAAGATGTAGATGTGGATCATGTTGCTCAAATTGCTGTCAGGGCTGTTCTTCAGGCAAGTGGGCAGAACTGTGCTGGGGCTGAGCGATTTTATGTCCACAGGAACGTATATGCATCCTTTGTCAGTAAAGTTACCAAAATTATAAAATCTGTTACAGCTGACCCACCACTTGCTGGAAAATATGATATGGGAGCTTTATGTATGCATGCGCATTCTGAAAAGCTTCAAAGCCTTATAAATGATGCTTTAGAGAAAGGAGCTGAAATTATTGCACGAGGAAGTTTTGGACATATAGGTGAAGGTGCAGTTGATCAATATTTCCCCCCTACGGTGATTGTGAATGTGAATCACTCAATGAGATTGATGCAGGAAGAGGCCTTTGGACCAATCATGCCAATTATGAAATTTAGCTCCGATGAAGAGGTTGTGAGGCTTGCAAATGATTCAAAATTTGGGCTTGGATGTGCTGTTTTCTCAGGCAGTCAGAGCCGGGCTAGAGATATAGCTTCCCAGATACATTGTGGGATTGCAGCGATTAATGATTTTGGTGCGACATACATGTGTCAGTCGCTGCCATTCGGGGGTGTGAAACAAAGTGGATTTGGACGATTTGGTGGTGCAGAAGGTTTGCGGGCATGCTGCCTTGTAAAAGCTGTTGTTGAAGATAGATGGTGGCCATTCATCAAAACCGTGATACCGAAGCCTCTTCAGTATCCTGTTGCAGAAAATGGATTTGAGTTCCAGGAATCGCTTGTTGAAGCACTATTCGGGCTCAGCCTATGGGACCGTTTGCAAGCATTGGTTAACGTGCTGAAAATGCTTACTGAGCAGAGCTCTCTACGTGGCAGTAGAAAAAAGAAAGATGATTAA 1794 0.4392 MAFWWLLLVLALAFVICKFLLILIPPKVPSIHVDSSDVLDDGNQTQENGFIYVPPRGTAQQSNGKVQCYEPATMKYLGYVPALMPDEVREQVEKVREAQKMWAKTSFKQRRQFLRILLKYIIKHQELICEISSRDTGKTMVDASFGEIMTTCEKINWLLSEGEQCLKPEYRSSGRAMFHKRARVELHPLGVIGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSEHASWSGCFYFRIIQSALAAIGAPEDLVEVITGFAETGEALVSSVDKVIFVGSPGIGKMIMSNAAEKLIPVTLELGGKDAFIVCEDVDVDHVAQIAVRAVLQASGQNCAGAERFYVHRNVYASFVSKVTKIIKSVTADPPLAGKYDMGALCMHAHSEKLQSLINDALEKGAEIIARGSFGHIGEGAVDQYFPPTVIVNVNHSMRLMQEEAFGPIMPIMKFSSDEEVVRLANDSKFGLGCAVFSGSQSRARDIASQIHCGIAAINDFGATYMCQSLPFGGVKQSGFGRFGGAEGLRACCLVKAVVEDRWWPFIKTVIPKPLQYPVAENGFEFQESLVEALFGLSLWDRLQALVNVLKMLTEQSSLRGSRKKKDD 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g01842 597 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 297 304 IPR029510 GO:0016491
Viun6g01842 597 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 66 525 IPR016162 GO:0016491
Viun6g01842 597 FunFam aldehyde dehydrogenase 22A1 65 320 - -
Viun6g01842 597 CDD ALDH_F15-22 69 531 - -
Viun6g01842 597 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 325 336 IPR016160 GO:0016491
Viun6g01842 597 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 305 500 IPR016163 GO:0016620
Viun6g01842 597 FunFam Aldehyde dehydrogenase A 301 495 - -
Viun6g01842 597 SUPERFAMILY ALDH-like 60 529 IPR016161 GO:0016491
Viun6g01842 597 Pfam Aldehyde dehydrogenase family 61 527 IPR015590 GO:0016491
Viun6g01842 597 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 59 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g01842 Viun-Chr6 25556614 25563001 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g01842 1 595 Aldehyde Dehydrogenase Gene Family AT3G66658 77.311 0.0 996
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g01842 - - gmx:100797873 1100.12