Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g01837 ATGGAGAGCCAACAGGAAGTGATGGTAGTAGAAAAGGTATGTGAAATCTATGAGGAAATCTCCAAACTTGGAGACCTCAACCCCTCAAGCCATGTTAACAACCTCTTCACCCAACTTGTCACCATTTGCACCACCCCATGTCAAATAGAAGTTTCTCAGCTGAACCAACAGGTTAGAGAAACCATAGCAAAACTGATTAGACTATGTGGAAAAGCTGAAGGGCTTCTTGAGAGTCATTATTCAACCCTCATAGGATCACATGAGAACCCTTTAAACCACATGAAACTCTTTCCCTACTACTCTAATTACCTCAAACTAAGTCACTTGGAGTTCACCATGCTCACCACACACTGCACCCAAGTCCCCTCCCAACTTGCCTTTGTGGGCTCAGGTCCCCTTCCTCTCACCTCGATCATTTTGGCCACCCATTACCTCACACAAACATGCTTCCACAACTACGACATGGATCCTTCGGCAAATGCCAAGGCTCATGGCTTGGTCTCTTCCGACCCTGACTTGTCCAAGAGAATGTTCTTCCACACTGATGACATTCTAAACGTGTCAATTGGCCTCAAGGACTATAACGTGGTCTATTTGGCTGCACTTGTGGGCATGGACCATGAGGAGAAAGCGGAAATTATCAAGCACCTTGCCAAGTTCATGGCCCCAGGAGCTATTTTGCTGCTGAGGAGTGCACATGGTGGTCGAGCCTTCCTCTACCCTGTGGTTGATCCTTCTTCTGATCTCAAAGGTTTTGAAGTTCTCTCGGTTTTTCATCCCACTGATGAGGTTATTAACTCGGTTATTGTTGCACGCAAGCATTTGGTGACTCAAGGGACTTATTCAGCAGTGCTGGCTAGCAAATGCTCTGGTGTTGAAGGGTTTAATCCCTTCATCCATGGGAACGTTATTGAGGAGTTGACAGTTGAGGATCAAGCTTGA 942 0.4628 MESQQEVMVVEKVCEIYEEISKLGDLNPSSHVNNLFTQLVTICTTPCQIEVSQLNQQVRETIAKLIRLCGKAEGLLESHYSTLIGSHENPLNHMKLFPYYSNYLKLSHLEFTMLTTHCTQVPSQLAFVGSGPLPLTSIILATHYLTQTCFHNYDMDPSANAKAHGLVSSDPDLSKRMFFHTDDILNVSIGLKDYNVVYLAALVGMDHEEKAEIIKHLAKFMAPGAILLLRSAHGGRAFLYPVVDPSSDLKGFEVLSVFHPTDEVINSVIVARKHLVTQGTYSAVLASKCSGVEGFNPFIHGNVIEELTVEDQA 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g01837 313 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 278 IPR004298 GO:0030410|GO:0030418
Viun6g01837 313 PANTHER NICOTIANAMINE SYNTHASE 3 3 280 IPR004298 GO:0030410|GO:0030418
Viun6g01837 313 Pfam Nicotianamine synthase protein 6 276 IPR004298 GO:0030410|GO:0030418
Viun6g01837 313 Gene3D Vaccinia Virus protein VP39 7 274 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g01837 Viun-Chr6 25523986 25525212 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g01837 5 273 Nicotianamine Synthase Gene Family AT5G04950 57.509 7.14e-114 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g01837 K05953 - gmx:100814069 538.495