Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g01829 ATGGGTGGCAGTGGGGAGAAGAGAGTGAAGGGTTTTCAGGGGAAGAAAGAAGGGTTCCGGGGAGGAGTGCCGAAAGGGTGTTTGGCCATAAAGGTGGGTCAAGGAGACGACCAACAACGGTTCGTGGTGCCGGTGATGTACTTCAACCACCCTCTCTTCATGCAGCTTCTCAAGGAAGCAGAGGAAGAGTACGGCTTCGATCAAAAAGGAACCATAACCATCCCTTGTCACGTGGAGCAGTTCAGGAACGTTCGAGGCATCATCGACAGCGAAAAGTCTCTCCTTCACCATAATCATCACGTTCGCTGCTTCGGCTTCTGA 321 0.5234 MGGSGEKRVKGFQGKKEGFRGGVPKGCLAIKVGQGDDQQRFVVPVMYFNHPLFMQLLKEAEEEYGFDQKGTITIPCHVEQFRNVRGIIDSEKSLLHHNHHVRCFGF 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g01829 106 Pfam Auxin responsive protein 17 84 IPR003676 GO:0009733
Viun6g01829 106 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 16 83 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g01829 Viun-Chr6 25428310 25429185 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g01829 23 100 Calmodulin-binding Proteins AT5G20810 44.872 6.34e-18 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g01829 K14488 - var:108342322 215.312
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun6g01829 6 25428310 25429185 Viun10g02208 10 36900326 36901255 PCT