Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g01828 ATGAAGTTGAGCATAAGCTTCAAACAAACCTATGAGGTTGAGCAGCAGGAGGTAAAGGAAGTGGTGATGGTGAGAAAAGAGATACGAAAAGGGTGCATGAAAATAAAGGTGGGTGGTGAAGGCGAAGAGCAGCAGAAAATAACGGTGCCGGTGAATTACCTGAAGCACCCACTCTTTGTTCAGCTTTTGAAGGAGGCGGAGGAAGAGTACGGCTTTACACACAAGGGCACCATAACTATCCCTTGTCAACTCGCCCAGTTTAAGCACGTTCAGCACTTGATCGATGCCGAAACCTCCCTTCACCACCACCATCATCTTCACCTCGTTCCCTGTTTCCGAGCTTAA 345 0.4783 MKLSISFKQTYEVEQQEVKEVVMVRKEIRKGCMKIKVGGEGEEQQKITVPVNYLKHPLFVQLLKEAEEEYGFTHKGTITIPCQLAQFKHVQHLIDAETSLHHHHHLHLVPCFRA 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g01828 114 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 20 90 IPR003676 GO:0009733
Viun6g01828 114 Pfam Auxin responsive protein 26 93 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g01828 Viun-Chr6 25417973 25418317 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g01828 27 95 Calmodulin-binding Proteins AT3G43120 42.029 3.38e-14 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g01828 K14488 - gmx:100500512 143.28