Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g01765 ATGGAAGCGAGCCCGAAAAGAAAACATTCTAGCCTGATTCATGAACTTATCCAAGGTAAGGAGCTAGCAAAGCAGCTCGGTAACCATCTGGTTTCTTCTTCTCCATCGTCCCATGAAACCAATGAACTGTTGGTTGATAAAATTCTCTCGTCCTATGAGAAAGTACTCACCATGCTGAACTGGGGGGCTACTGTGGGAGAGGCCAAAACCACCAGTGCCACCTTGATGGATTCCCATTCTTCTTTTACAAATGGTGGGAGTCCCAAAAGTGAGGTCGTGGACCGTGAATTAGAGCACAAAGCTGTCCTCAAGAAAAGAAAGACCATGCCTAGATGGACGGAGCAAGTGAAGATTTGCTCGAGAACAGGACTTGAGGGGTCATTGGATGATGGATATAGCTGGAGGAAATACGGGCAGAAGGATATTCTTGGAGCCAAGTTTCCAAGAGGATATTACAGATGCACACATAGAAATGTTCAAGGTTGTCTGGCAACTAAACAAGTTCAAAGGTCGGATGAAGATCCGACAACGATTGAGGTGACCTATAGAGGAAGACATACGTGCACGCAAGCTAAGTATTTGAACAAGGTATTCCCATCAAACATAAAGATGGGTTTGGGGGAAAATCAATTCCACAATGATCAAACTAATCAACCACTTGAAGAGAAAATACAGCAAACCCCAGTGGGGATTTTCGCCTTTGAAACAGAGCATAGAGTTAAAAGAGAGGAATTGGAAATCAAGGAGGATATCTTTCCATGGTTTTCATTTCATTCTCAATCAAATGGATCAGAAAACGGGGACAACATGTTACCCGAGTCGAATTTTGAAAACCATTTCACGGAAAGCTTTTCTCCTGCATTCATATCACCAGAGACTTCAGAATCAAACCCTTTCTGTTTGTCAACGTGCTACTTGGACAACACTGAACTGTTATGCCAACAGATACAAACCTCAGATTCTGATATCACTGAGACATTTTCAGCCCCAACTTCAGTAACCAACTCCCCAATCCTGGATTTGGACATTTTGCTTCATAAAGGGGATTTTGACACGGATTTCCCTTTCAACAACCCTGATTTTTTCTCTTCATTTGAGCTTCCCTGCACTTCCACTTAG 1119 0.429 MEASPKRKHSSLIHELIQGKELAKQLGNHLVSSSPSSHETNELLVDKILSSYEKVLTMLNWGATVGEAKTTSATLMDSHSSFTNGGSPKSEVVDRELEHKAVLKKRKTMPRWTEQVKICSRTGLEGSLDDGYSWRKYGQKDILGAKFPRGYYRCTHRNVQGCLATKQVQRSDEDPTTIEVTYRGRHTCTQAKYLNKVFPSNIKMGLGENQFHNDQTNQPLEEKIQQTPVGIFAFETEHRVKREELEIKEDIFPWFSFHSQSNGSENGDNMLPESNFENHFTESFSPAFISPETSESNPFCLSTCYLDNTELLCQQIQTSDSDITETFSAPTSVTNSPILDLDILLHKGDFDTDFPFNNPDFFSSFELPCTST 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g01765 372 Pfam WRKY DNA -binding domain 129 188 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun6g01765 372 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 10 314 IPR044810 GO:0003700
Viun6g01765 372 SMART WRKY_cls 128 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun6g01765 372 FunFam WRKY transcription factor 53 114 191 - -
Viun6g01765 372 ProSiteProfiles WRKY domain profile. 123 186 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun6g01765 372 Gene3D WRKY domain 115 191 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun6g01765 372 SUPERFAMILY WRKY DNA-binding domain 127 190 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g01765 Viun-Chr6 24991923 24994292 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g01765 16 199 WRKY Transcription Factor Family AT5G24110 47.283 6.37e-53 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Viun6g01765 WRKY 5.6e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g01765 - - gmx:100790050 588.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun6g01765 6 24991923 24994292 Viun10g02126 10 36145180 36147494 PCT