Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g01734 ATGGGAAACAATGAGGAAGAAAAATCTACCAAGACTGAAAAGCCTTCTTCACCTGTAACAATGGATCAGGCCAATCAGACCAACCAGCCCAATATTCATGTATATCCTGATTGGGCAGCCATGCAGGCATATTATGGGCCAAGAGTCACCATGCCACCATACTACAACTCGGCTGTGGCTTCTGGTCACGCTCCTCACCCATACATGTGGGGTCCACCACAGGTACCTATGATGCCACCTTATGGGCCTCCTTATGCAGCAATTTATTCACATGGAGGGGTTTACCCTGCAGTTCCTATTGGGCCACATACACATAGTCAAGGAGTTCCGTCTTCACCTGCTGCTGTGACTCCTTTAAGCATAGAGACACCACCCAAATCATCAGGAAATAATGATCAGGGTTTAATGAAGAAATTGAAGGAGTTTGATGGACTTGCTATGTCAATAGGCAATGGCCATGCTGAAAGTGCAGAGCGTGGAGGTGAAAACAGGCTGTCACCGAGTGTGGATACTGAGGGTTCCAGTGATGGAAGTGATGGCAACACTTCAGGGGCTAATCCAACAAGAAGGAAAAGAAGCCGTGGGGGAACACCAACCACTGCAGATGGAGAAGGAAAAACTGAGATACAAAGCAGTCCCATTTCCAAAGATATTGCAGCTTCTAATAAGATCGTGGCAGTTGCCCCCGCCAGTGTTGCAGGAACAATAGTTGGACCTGTAGTTTCTTCAGGTATGACCACTGTGCTGGAGCTGAGAAATCCCTCCAGTGTTCATTCTAAAGCAAATGCCACAAGTGCACCACAACCTTCTGTATTGCCTGCAGAAGCTTGGTTACAGAATGAGCGCGAGCTGAAACGAGAGAGGCGGAAACAATCTAACCGAGAATCCGCTAGAAGGTCCAGACTACGGAAGCAGGCTGAAACCGAAGAACTGGCACGAAAAGTTGATGCCTTGAATTCTGAGAATGAGACACTGAAATCAGAACTAAATCGACTGACTGAAAGTTCCGAAAAAATGAGGGTGGAAAATGCAACATTAAGGGAAAAACTTAAAATTGCTCGACTGGGACAAACACAAGAGATAACTTTGAACATAATTGACAGCGAGAGGGCTACACCTGTAAGCACAGAAAACTTACTATCTAGAGTTAATAATAATTCCAGTTCCAACGATAGAACTATGGAGGATGAGAATGATTTTTGTGAAAATAAACCAAACTCTGGTGCAAAGCTGCATCAACTACTGGACACAAGTCCTAGAGCTGATGCTGTGGCAGCTGGTTGA 1284 0.4556 MGNNEEEKSTKTEKPSSPVTMDQANQTNQPNIHVYPDWAAMQAYYGPRVTMPPYYNSAVASGHAPHPYMWGPPQVPMMPPYGPPYAAIYSHGGVYPAVPIGPHTHSQGVPSSPAAVTPLSIETPPKSSGNNDQGLMKKLKEFDGLAMSIGNGHAESAERGGENRLSPSVDTEGSSDGSDGNTSGANPTRRKRSRGGTPTTADGEGKTEIQSSPISKDIAASNKIVAVAPASVAGTIVGPVVSSGMTTVLELRNPSSVHSKANATSAPQPSVLPAEAWLQNERELKRERRKQSNRESARRSRLRKQAETEELARKVDALNSENETLKSELNRLTESSEKMRVENATLREKLKIARLGQTQEITLNIIDSERATPVSTENLLSRVNNNSSSNDRTMEDENDFCENKPNSGAKLHQLLDTSPRADAVAAG 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g01734 427 Coils Coil 274 294 - -
Viun6g01734 427 CDD bZIP_plant_GBF1 286 334 IPR045314 GO:0003700|GO:0006355
Viun6g01734 427 FunFam BZIP transcription factor 283 334 - -
Viun6g01734 427 MobiDBLite consensus disorder prediction 167 194 - -
Viun6g01734 427 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 403 IPR044827 GO:0003700|GO:0006355|GO:0043565
Viun6g01734 427 Gene3D - 284 338 - -
Viun6g01734 427 Pfam bZIP transcription factor 281 343 IPR004827 GO:0003700|GO:0006355
Viun6g01734 427 MobiDBLite consensus disorder prediction 152 217 - -
Viun6g01734 427 MobiDBLite consensus disorder prediction 14 33 - -
Viun6g01734 427 MobiDBLite consensus disorder prediction 104 134 - -
Viun6g01734 427 SUPERFAMILY Leucine zipper domain 284 339 IPR046347 GO:0003700|GO:0006355
Viun6g01734 427 MobiDBLite consensus disorder prediction 381 427 - -
Viun6g01734 427 Pfam Disordered region downstream of MFMR 132 261 - -
Viun6g01734 427 MobiDBLite consensus disorder prediction 1 33 - -
Viun6g01734 427 Coils Coil 301 349 - -
Viun6g01734 427 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 288 303 IPR004827 GO:0003700|GO:0006355
Viun6g01734 427 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 283 346 IPR004827 GO:0003700|GO:0006355
Viun6g01734 427 MobiDBLite consensus disorder prediction 105 134 - -
Viun6g01734 427 MobiDBLite consensus disorder prediction 203 217 - -
Viun6g01734 427 SMART brlzneu 281 345 IPR004827 GO:0003700|GO:0006355
Viun6g01734 427 MobiDBLite consensus disorder prediction 282 315 - -
Viun6g01734 427 Pfam G-box binding protein MFMR 1 97 IPR012900 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g01734 Viun-Chr6 24824142 24829190 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g01734 1 427 bZIP Transcription Factor Family AT2G46270 49.192 3.28e-113 334
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Viun6g01734 MFMR_assoc 5.1e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g01734 K09060 - gmx:100781875 699.893