Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g01733 ATGGGAAACAATGAGGAAGAAAAATCTACCAAGACTGAAAAGCCTTCTTCACCTGTAACAATGGATCAGGCCAATCAGACCAACCAGCCCAATATTCATGTATATCCTGATTGGGCAGCCATGCAGGCATATTATGGGCCAAGAGTCACCATGCCACCATACTACAACTCGGCTGTGGCTTCTGGTCACGCTCCTCACCCATACATGTGGGGTCCACCACAGCCTATGATGCCACCTTATGGGCCTCCTTATGCAGCAATTTATTCACATGGAGGGGTTTACCCTGCAGTTCCTATTGGGCCACATACACATAGTCAAGGAGTTCCGTCTTCACCTGCTGCTGTGACTCCTTTAAGCATAGAGACACCACCCAAATCATCAGGAAATAATGATCAGGGTTTAATGAAGAAATTGAAGGAGTTTGATGGACTTGCTATGTCAATAGGCAATGGCCATGCTGAAAGTGCAGAGCGTGGAGGTGAAAACAGGCTGTCACCGAGTGTGGATACTGAGGGTTCCAGTGATGGAAGTGATGGCAACACTTCAGGGGCTAATCCAACAAGAAGGAAAAGAAGCCGTGGGGGAACACCAACCACTGATGGAGAAGGAAAAACTGAGATACAAAGCAGTCCCATTTCCAAAGATATTGCAGCTTCTAATAAGATCGTGGCAGTTGCCCCCGCCAGTGTTGCAGGAACAATAGTTGGACCTGTAGTTTCTTCAGGTATGACCACTGTGCTGGAGCTGAGAAATCCCTCCAGTGTTCATTCTAAAGCAAATGCCACAAGTGCACCACAACCTTCTGTATTGCCTGCAGAAGCTTGGTTACAGAATGAGCGCGAGCTGAAACGAGAGAGGCGGAAACAATCTAACCGAGAATCCGCTAGAAGGTCCAGACTACGGAAGCAGGCTGAAACCGAAGAACTGGCACGAAAAGTTGATGCCTTGAATTCTGAGAATGAGACACTGAAATCAGAACTAAATCGACTGACTGAAAGTTCCGAAAAAATGAGGGTGGAAAATGCAACATTAAGGGAAAAACTTAAAATTGCTCGACTGGGACAAACACAAGAGATAACTTTGAACATAATTGACAGCGAGAGGGCTACACCTGTAAGCACAGAAAACTTACTATCTAGAGTTAATAATAATTCCAGTTCCAACGATAGAACTATGGAGGATGAGAATGATTTTTGTGAAAATAAACCAAACTCTGGTGCAAAGCTGCATCAACTACTGGACACAAGTCCTAGAGCTGATGCTGTGGCAGCTGGTTGA 1278 0.4554 MGNNEEEKSTKTEKPSSPVTMDQANQTNQPNIHVYPDWAAMQAYYGPRVTMPPYYNSAVASGHAPHPYMWGPPQPMMPPYGPPYAAIYSHGGVYPAVPIGPHTHSQGVPSSPAAVTPLSIETPPKSSGNNDQGLMKKLKEFDGLAMSIGNGHAESAERGGENRLSPSVDTEGSSDGSDGNTSGANPTRRKRSRGGTPTTDGEGKTEIQSSPISKDIAASNKIVAVAPASVAGTIVGPVVSSGMTTVLELRNPSSVHSKANATSAPQPSVLPAEAWLQNERELKRERRKQSNRESARRSRLRKQAETEELARKVDALNSENETLKSELNRLTESSEKMRVENATLREKLKIARLGQTQEITLNIIDSERATPVSTENLLSRVNNNSSSNDRTMEDENDFCENKPNSGAKLHQLLDTSPRADAVAAG 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g01733 425 Pfam Disordered region downstream of MFMR 131 259 - -
Viun6g01733 425 MobiDBLite consensus disorder prediction 166 212 - -
Viun6g01733 425 MobiDBLite consensus disorder prediction 382 425 - -
Viun6g01733 425 Coils Coil 299 347 - -
Viun6g01733 425 MobiDBLite consensus disorder prediction 103 133 - -
Viun6g01733 425 MobiDBLite consensus disorder prediction 151 212 - -
Viun6g01733 425 MobiDBLite consensus disorder prediction 14 33 - -
Viun6g01733 425 SUPERFAMILY Leucine zipper domain 282 337 IPR046347 GO:0003700|GO:0006355
Viun6g01733 425 Coils Coil 272 292 - -
Viun6g01733 425 CDD bZIP_plant_GBF1 284 332 IPR045314 GO:0003700|GO:0006355
Viun6g01733 425 MobiDBLite consensus disorder prediction 104 133 - -
Viun6g01733 425 MobiDBLite consensus disorder prediction 280 306 - -
Viun6g01733 425 MobiDBLite consensus disorder prediction 1 33 - -
Viun6g01733 425 Pfam G-box binding protein MFMR 1 96 IPR012900 -
Viun6g01733 425 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 281 344 IPR004827 GO:0003700|GO:0006355
Viun6g01733 425 Pfam bZIP transcription factor 279 341 IPR004827 GO:0003700|GO:0006355
Viun6g01733 425 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 401 IPR044827 GO:0003700|GO:0006355|GO:0043565
Viun6g01733 425 Gene3D - 282 336 - -
Viun6g01733 425 SMART brlzneu 279 343 IPR004827 GO:0003700|GO:0006355
Viun6g01733 425 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 286 301 IPR004827 GO:0003700|GO:0006355
Viun6g01733 425 FunFam BZIP transcription factor 281 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g01733 Viun-Chr6 24823093 24829190 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g01733 1 425 bZIP Transcription Factor Family AT2G46270 48.956 4.78e-115 339
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Viun6g01733 MFMR_assoc 5.7e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g01733 K09060 - gmx:100781875 702.59