Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g01732 ATGGGAAACAATGAGGAAGAAAAATCTACCAAGACTGAAAAGCCTTCTTCACCTGTAACAATGGATCAGGCCAATCAGACCAACCAGCCCAATATTCATGTATATCCTGATTGGGCAGCCATGCAGGCATATTATGGGCCAAGAGTCACCATGCCACCATACTACAACTCGGCTGTGGCTTCTGGTCACGCTCCTCACCCATACATGTGGGGTCCACCACAGGTACCTATGATGCCACCTTATGGGCCTCCTTATGCAGCAATTTATTCACATGGAGGGGTTTACCCTGCAGTTCCTATTGGGCCACATACACATAGTCAAGGAGTTCCGTCTTCACCTGCTGCTGTGACTCCTTTAAGCATAGAGACACCACCCAAATCATCAGGAAATAATGATCAGGGTTTAATGAAGAAATTGAAGGAGTTTGATGGACTTGCTATGTCAATAGGCAATGGCCATGCTGAAAGTGCAGAGCGTGGAGGTGAAAACAGGCTGTCACCGAGTGTGGATACTGAGGGTTCCAGTGATGGAAGTGATGGCAACACTTCAGGGGCTAATCCAACAAGAAGGAAAAGAAGCCGTGGGGGAACACCAACCACTGATGGAGAAGGAAAAACTGAGATACAAAGCAGTCCCATTTCCAAAGATATTGCAGCTTCTAATAAGATCGTGGCAGTTGCCCCCGCCAGTGTTGCAGGAACAATAGTTGGACCTGTAGTTTCTTCAGGTATGACCACTGTGCTGGAGCTGAGAAATCCCTCCAGTGTTCATTCTAAAGCAAATGCCACAAGTGCACCACAACCTTCTGTATTGCCTGCAGAAGCTTGGTTACAGAATGAGCGCGAGCTGAAACGAGAGAGGCGGAAACAATCTAACCGAGAATCCGCTAGAAGGTCCAGACTACGGAAGCAGGCTGAAACCGAAGAACTGGCACGAAAAGTTGATGCCTTGAATTCTGAGAATGAGACACTGAAATCAGAACTAAATCGACTGACTGAAAGTTCCGAAAAAATGAGGGTGGAAAATGCAACATTAAGGGAAAAACTTAAAATTGCTCGACTGGGACAAACACAAGAGATAACTTTGAACATAATTGACAGCGAGAGGGCTACACCTGTAAGCACAGAAAACTTACTATCTAGAGTTAATAATAATTCCAGTTCCAACGATAGAACTATGGAGGATGAGAATGATTTTTGTGAAAATAAACCAAACTCTGGTGCAAAGCTGCATCAACTACTGGACACAAGTCCTAGAGCTGATGCTGTGGCAGCTGGTTGA 1281 0.4551 MGNNEEEKSTKTEKPSSPVTMDQANQTNQPNIHVYPDWAAMQAYYGPRVTMPPYYNSAVASGHAPHPYMWGPPQVPMMPPYGPPYAAIYSHGGVYPAVPIGPHTHSQGVPSSPAAVTPLSIETPPKSSGNNDQGLMKKLKEFDGLAMSIGNGHAESAERGGENRLSPSVDTEGSSDGSDGNTSGANPTRRKRSRGGTPTTDGEGKTEIQSSPISKDIAASNKIVAVAPASVAGTIVGPVVSSGMTTVLELRNPSSVHSKANATSAPQPSVLPAEAWLQNERELKRERRKQSNRESARRSRLRKQAETEELARKVDALNSENETLKSELNRLTESSEKMRVENATLREKLKIARLGQTQEITLNIIDSERATPVSTENLLSRVNNNSSSNDRTMEDENDFCENKPNSGAKLHQLLDTSPRADAVAAG 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g01732 426 Gene3D - 283 337 - -
Viun6g01732 426 CDD bZIP_plant_GBF1 285 333 IPR045314 GO:0003700|GO:0006355
Viun6g01732 426 Pfam Disordered region downstream of MFMR 132 260 - -
Viun6g01732 426 MobiDBLite consensus disorder prediction 281 307 - -
Viun6g01732 426 MobiDBLite consensus disorder prediction 14 33 - -
Viun6g01732 426 MobiDBLite consensus disorder prediction 383 426 - -
Viun6g01732 426 Coils Coil 300 348 - -
Viun6g01732 426 SMART brlzneu 280 344 IPR004827 GO:0003700|GO:0006355
Viun6g01732 426 MobiDBLite consensus disorder prediction 104 134 - -
Viun6g01732 426 SUPERFAMILY Leucine zipper domain 283 338 IPR046347 GO:0003700|GO:0006355
Viun6g01732 426 FunFam BZIP transcription factor 282 333 - -
Viun6g01732 426 MobiDBLite consensus disorder prediction 1 33 - -
Viun6g01732 426 Pfam bZIP transcription factor 280 342 IPR004827 GO:0003700|GO:0006355
Viun6g01732 426 Coils Coil 273 293 - -
Viun6g01732 426 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 287 302 IPR004827 GO:0003700|GO:0006355
Viun6g01732 426 MobiDBLite consensus disorder prediction 105 134 - -
Viun6g01732 426 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 402 IPR044827 GO:0003700|GO:0006355|GO:0043565
Viun6g01732 426 MobiDBLite consensus disorder prediction 167 213 - -
Viun6g01732 426 Pfam G-box binding protein MFMR 1 97 IPR012900 -
Viun6g01732 426 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 282 345 IPR004827 GO:0003700|GO:0006355
Viun6g01732 426 MobiDBLite consensus disorder prediction 152 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g01732 Viun-Chr6 24823090 24829190 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g01732 1 426 bZIP Transcription Factor Family AT2G46270 48.611 3.73e-114 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Viun6g01732 MFMR_assoc 5.7e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g01732 K09060 - gmx:100781875 704.516