Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g01666 ATGTCTTCATCTTCTCGTGTTCTTCCCACTCCCCTAGAAAACAAGTATATGAAACCCCCAGATTCTTGTCATCTTTCACCTGCTAGTGCAAATCCTGTCTCATCAAATGCAATCAGAAGTGCTGGCAAGATGATCTCATCACCCTCTGAATACCCTGATGGCATTGGCACCCCTTTTTCCTATGCTTCACAGCATGATAGGCAAAATGAAGATCTCCCCTTTGTTTCTCAGACATTGGATGACAATGTGTCTTCCGAAATACACTCAACAACATTCATTTCTCACCCTCATGAGAGCACAGATATCACCTGGGGACCAGATCCATTTCAAGATATTCTTAGCTTTCCCGAGAATATTTCTGCCCAGCATGATCAGGTTGTAGACAGTTCCTGTTACATAAATGATGATAATGTCAAAAGAACCGATTTTGGGGAGTGGGTTGATCAGTTAATGTCAATTGATGATTCTCTTCACCCCAACTGGAGTCAGCTTCTTGGTGATGACAATGTTGCAGAACCAAAGCCAAAGGTTCCTCAGTTGCTGGATATACCATCTGGAGAAGTTAATGGCAATTCAGGAGCAACCACACCACAGACTAAGACTAGAATGCGTTGGACTCCAGAACTTCACGAGGCCTTTGTGGAAGCAGTAAATCAGCTTGGTGGTAGTGAGAAGGCTACTCCAAAGGGTGTGTTGAATCTGATGAAAGTTGATGGCCTTACCATCTATCATGTAAAAAGCCACTTGCAGAAGTATAGAACTGCCAGATACAAACCAGAGCCATCAGAAGGAACATCAGAGAAAAAGACGACTCCAATAGAAGAAATGAAATCTCTAGACTTAAAAACGAGTAAAGGGATCACTGAAGCATTACGATTGCAGATGGATCTCCAGAAGCGACTTCACGAGCAACTCGAGATCCAAAGAAAGTTGCAGATTCAAATCGAAGACCAAGGGAAACGTCTTCAGATGATGTTTGAGAAACAAAGAGAGATGGGTGACAAGAAGGTTAATGGCTCCTCCGGAGAGGCCGCCGCTGCCACCACCGCCACCGCTACCCCTTCTTCTCCTCCGGTAGAAACCTCAAATGAGGAACGTGAGAAAGTCATGCATGAAGAGAAGAACGGAAGCACAAAGCAAAAAGTAAGTGAAGGTGAAGAAGTGATGAATGAAGGTGAAGAAGTGAAGAATGAAAATGAAGATGAAGATGAAGTTGGTCCAGCTACAAAACGGGTGAAAAGTTCATAA 1248 0.4359 MSSSSRVLPTPLENKYMKPPDSCHLSPASANPVSSNAIRSAGKMISSPSEYPDGIGTPFSYASQHDRQNEDLPFVSQTLDDNVSSEIHSTTFISHPHESTDITWGPDPFQDILSFPENISAQHDQVVDSSCYINDDNVKRTDFGEWVDQLMSIDDSLHPNWSQLLGDDNVAEPKPKVPQLLDIPSGEVNGNSGATTPQTKTRMRWTPELHEAFVEAVNQLGGSEKATPKGVLNLMKVDGLTIYHVKSHLQKYRTARYKPEPSEGTSEKKTTPIEEMKSLDLKTSKGITEALRLQMDLQKRLHEQLEIQRKLQIQIEDQGKRLQMMFEKQREMGDKKVNGSSGEAAAATTATATPSSPPVETSNEEREKVMHEEKNGSTKQKVSEGEEVMNEGEEVKNENEDEDEVGPATKRVKSS 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g01666 415 FunFam Myb family transcription factor 199 257 - -
Viun6g01666 415 MobiDBLite consensus disorder prediction 180 200 - -
Viun6g01666 415 NCBIfam myb-like DNA-binding domain, SHAQKYF class 200 254 IPR006447 GO:0003677
Viun6g01666 415 MobiDBLite consensus disorder prediction 342 360 - -
Viun6g01666 415 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 198 257 IPR017930 -
Viun6g01666 415 MobiDBLite consensus disorder prediction 1 34 - -
Viun6g01666 415 SUPERFAMILY Homeodomain-like 198 254 IPR009057 -
Viun6g01666 415 Gene3D - 199 258 - -
Viun6g01666 415 MobiDBLite consensus disorder prediction 361 392 - -
Viun6g01666 415 Pfam Myb-like DNA-binding domain 202 253 IPR001005 -
Viun6g01666 415 MobiDBLite consensus disorder prediction 254 277 - -
Viun6g01666 415 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 191 382 IPR044848 GO:0003700
Viun6g01666 415 Pfam MYB-CC type transfactor, LHEQLE motif 287 331 IPR025756 -
Viun6g01666 415 MobiDBLite consensus disorder prediction 185 200 - -
Viun6g01666 415 MobiDBLite consensus disorder prediction 330 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g01666 Viun-Chr6 24368259 24371365 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g01666 27 393 G2-like Transcription Factor Family AT3G04450 41.832 8.32e-83 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Viun6g01666 Myb_DNA-binding 1.4e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g01666 - - gmx:100803267 578.17