Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g01664 ATGGCCCCTTCCGCAAGAGCTGAGAAGGCCTTTAGCTATATGAATGCGACCTTGGGAATTTCTAAGGAGCAGGTGAAGCCAGTGTTGATAAATCTGTTAAGAGTTTATGAAGGAAATTGGGAACTAATTGAAGATGAAAATTATCGGACACTTATAGAGGCGTACCTTGATTCCGAGAAAGACAAGGCAGTTGAAGGTGAGAGAAAACCTAATGGCAGTGGTGAGGGTGGACAAAAATCAACAGGGGAACCGTTCTTGGTAGATGTAGATGGTGACCTTGTTTTATCAATCATGGACAGCTCAAGCAAAATGTTTAGTGCAGAAGACAAAAAGCCATCATCAAAGGTCTTTGAGCAGAAAAACATTAAGCGATCTCAAACCTTCACGGAAGATGATAGGCCTCAAACCAGTTCACAGGCATTACATTCAACGGCGAGTGAGGCCAAAAAGATCTCTAGTTTACCTCGTGGATCAACTAAGGGTAGAGAATCAGACCATGAGAAAGCATCATCTGCAGGGCACCGTGGCCGGTTCGAGATGAACCCTGTGAAGCCAAGAGCTAAGAAACCCAAATTACTTAATTCGACGAATAATGCTGGAGATCTTTGTGTTAAACCTCCGTCAAATCAGGATTTGCAAAGTAAAAATCTTGTACCTGCCTGCATCAATGATACCCGTGCTTATAATGGATCTATTACAATCGGTAGTTCTTCACGTCTTGAAGAAGTTAAAATATCTTTGAATTGTGACTCAGCCTTGGCAGGACTCAACTTCAGTATTCCTGATTTGGCTGTTGTTATGAAGTTCATGGACAGGAAGTACCTTAGCTCTAGCAAAACTGCTGACCCTCAATTTTCTACGGCAAAGCTATTGAATGATCTTTGTAGCATTTTTCTCAAGTTGGGGATTCGAAAGGGATCAAATTCCAACCTAGCCAATTCAAATACGCTGCAATACGCTAGTGAAGAAGAAAGGAAACCCTTTAACTTTATCAGTGACATGACAAAAGGTTCAGAAAAAGTGAAAATATCGTTAATAGATGAATTTGGCGGTGAAACCTTGCCAAAGTTTAATTACATACCATGCAATATAATATATCAAAGTGCTATTGTAAGTATTTCTTTAGCCCGGATTTCGGATGAGGGTTGCTGTTCTGATTGTTCAGGCAACTGCCTTTCCTCATCATTACCTTGTGCGTGTGCTCGGGAAACTGGTGGGGAGTTTGCTTACACTCCTCAAGGTTTGTTGAAAGAAGAGTTTCTAACAGCTTGCGCGACTATGAAGACTGAACCTAAAGATCATCATTTTGTGTACTGTCAAGAGTGCCCTTTAGAGAAGTCCAAGAATGAGTACATGCCTGAACGATGCAAGGGGCATATGGTAAGGAAATTTATAAAGGAATGTTGGAGGAAATGCGGATGTGACATGCTTTGTGGGAATCGGATAGTGCAACGAGGTATTGCATGCAAATTGCAGGTGTTCTTAACTCGAGAAGGTAAAGGATGGGGCCTTAGACCGTTAGAAGATTTACCAAAAGGAACTTTTGTATGTGAATATGTTGGAGAAATATTAACCAATATGGAATTATACGATAGGATAATGCACGAGAGTGGTAATGACAGACATACATATCCTGTAACTCTTGATGCGGACTGGGGCTCAGAAAAGGGGTTAAAGGATGAGGAGGCACTATGTTTAGATGCAACATATAATGGAAATGTTGGAAGGTTCATCAATCATAGATGCTATGATGCAAATCTCATAGACATTCCCGTTGAAATAGAGAGTCCAGATCACCATTATTATCATCTTGCCTTCTTTACCAATAGGAATGTGAGTGCGTACGAGGAATTGACATGGGATTATGGTATTGATTTTGATGATGAAGATCATCCTATTAAAGCATTTCGGTGTTCTTGTGGAAGCGCCTTCTGCTATGATAAGAAACAAAAAGATATGGTTAGAATACGAGGAGATCGACCGACCGCTTCAGCTCGTAGAAGGGGTCAACACGAGGCTGATATTGTTAAGGATGATGTTGTTCAGCCTGAGACTTCCGATGTTGCTCAGAACCAGGAGCAGGGGATTGGTAATGATGGTGTAGGATTTCCAGGTGGTCCCTCTGATACATCTTTATTGACTCGGTACCAGGATCATGTTGCACGTATCATATGGGAGGGTCAGGATCGAGTTGTGAAACTAGTCTCCCATAGTAAAAAAGTGAAAAGATTTGGTCGTCCTCACCCTTCTGTTCTCCCTTTTGTGGTAAATTCTGGATTATCGCCTTTGTGCGATATTTTATATGACTATCCCGATACTGGATTAATCTTGGGTTTCGTGGAGAGATGGCATCCTGAGACTAATAGTTTTCATCTACCAATTGGTGAGATGACTATCTCTTTAGATGACGTGTGGTCCCTCGTTCATCTTCCTATCACCGGAGAGTTTTGCTCAACTGAACCTCTTGAATATGAAGATTCAATTCAGATTATGATGACACTTCTTGGGGTTGATCGGGCTATGGCTTCCGATGAGTTGAATTATTGTCGGGGTGCACAGGTCAGACTTAGTTGGCTGAGAGACCTCTATAACAGTTGTTGTGATAACCAGCTCTGGGAGTTTGCTGCACGAGCATATCTTTTGCATCTTGTAGGGTGCACCATATTCGCTAATAAAAGTGCGAGTTTTGTTCAAACCCATTACTTGAAGTTGTTTAGAGATCTTCCTATATGTCGTAAATATGCTTGGGGAGTTGCTGCTCTTGTCTACTTTTATGAGCAACTAGGAGATGCTAGCTTTGCAAATACAAAGCAATTAGCTGGATATCTACCTCTTTTACAGAGTTGGATATACGAGCACTTCCCTACATTGGGAAGGAAGCAGTTACGTGATACATATGTGGAAACTGAACCCCGTGCCACACGTTATGTCACTGGACGCGTTACTTCCACTATAGTTGATATTAGAGTCCAGTTGGATGCTTTAACATATGATGGGGTGATTTGGTGCCCATATGGAACACAAAGTCCTGCTCGACCACTTGTTGTATCTGCCATGTTTTCTGGCTTCCTCAGGCTTGGTATCCTCGTTCATCGTCATTTGCCAGAACGTGTGTTGCGACAATTTGGGTTTATGCAGCCTATTCCACGATCGCCAAATTCCCTTCCTATGGTGGACTTTGCTACTATTGATGATCGGTGGAGACACTACGATCAGTTTGTCGTAGTTCAAGTGGTCCCTGCGCCAACTCCATTTTCATGTGTGGATGGATATTTGCAGTGGTTTAGGAGGGTCTCCCATCCTTACATTGTACGCGGAGTTGAGGACGAGCGACTCAGCCTTGTGGTTATGCCCCGACTTCGTCGGAATTTGCCAGATGACATGCCAGTTCAGAGGACATCAGAGTCATCATCTTCTAGTTTATTGAGTGTCATTAAATGCATTGTCAACGGTCTTCAACGGATGATAGATTGCAGAGATGTTAGTGAGGGCACAGGTGCTTGGGATCGCACACATGAGTTATTACAGATAGCTCGTGATGCAATAGAAAAGGAAGAGAGTAGAGGATGA 3570 0.4244 MAPSARAEKAFSYMNATLGISKEQVKPVLINLLRVYEGNWELIEDENYRTLIEAYLDSEKDKAVEGERKPNGSGEGGQKSTGEPFLVDVDGDLVLSIMDSSSKMFSAEDKKPSSKVFEQKNIKRSQTFTEDDRPQTSSQALHSTASEAKKISSLPRGSTKGRESDHEKASSAGHRGRFEMNPVKPRAKKPKLLNSTNNAGDLCVKPPSNQDLQSKNLVPACINDTRAYNGSITIGSSSRLEEVKISLNCDSALAGLNFSIPDLAVVMKFMDRKYLSSSKTADPQFSTAKLLNDLCSIFLKLGIRKGSNSNLANSNTLQYASEEERKPFNFISDMTKGSEKVKISLIDEFGGETLPKFNYIPCNIIYQSAIVSISLARISDEGCCSDCSGNCLSSSLPCACARETGGEFAYTPQGLLKEEFLTACATMKTEPKDHHFVYCQECPLEKSKNEYMPERCKGHMVRKFIKECWRKCGCDMLCGNRIVQRGIACKLQVFLTREGKGWGLRPLEDLPKGTFVCEYVGEILTNMELYDRIMHESGNDRHTYPVTLDADWGSEKGLKDEEALCLDATYNGNVGRFINHRCYDANLIDIPVEIESPDHHYYHLAFFTNRNVSAYEELTWDYGIDFDDEDHPIKAFRCSCGSAFCYDKKQKDMVRIRGDRPTASARRRGQHEADIVKDDVVQPETSDVAQNQEQGIGNDGVGFPGGPSDTSLLTRYQDHVARIIWEGQDRVVKLVSHSKKVKRFGRPHPSVLPFVVNSGLSPLCDILYDYPDTGLILGFVERWHPETNSFHLPIGEMTISLDDVWSLVHLPITGEFCSTEPLEYEDSIQIMMTLLGVDRAMASDELNYCRGAQVRLSWLRDLYNSCCDNQLWEFAARAYLLHLVGCTIFANKSASFVQTHYLKLFRDLPICRKYAWGVAALVYFYEQLGDASFANTKQLAGYLPLLQSWIYEHFPTLGRKQLRDTYVETEPRATRYVTGRVTSTIVDIRVQLDALTYDGVIWCPYGTQSPARPLVVSAMFSGFLRLGILVHRHLPERVLRQFGFMQPIPRSPNSLPMVDFATIDDRWRHYDQFVVVQVVPAPTPFSCVDGYLQWFRRVSHPYIVRGVEDERLSLVVMPRLRRNLPDDMPVQRTSESSSSSLLSVIKCIVNGLQRMIDCRDVSEGTGAWDRTHELLQIARDAIEKEESRG 1189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g01664 1189 MobiDBLite consensus disorder prediction 131 153 - -
Viun6g01664 1189 MobiDBLite consensus disorder prediction 159 186 - -
Viun6g01664 1189 ProSiteProfiles SET domain profile. 489 623 IPR001214 GO:0005515
Viun6g01664 1189 CDD SET_SETDB-like 355 623 - -
Viun6g01664 1189 SUPERFAMILY SET domain 341 645 IPR046341 -
Viun6g01664 1189 Pfam SET domain 501 623 IPR001214 GO:0005515
Viun6g01664 1189 SMART set_7 489 629 IPR001214 GO:0005515
Viun6g01664 1189 ProSiteProfiles Pre-SET domain profile. 387 486 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Viun6g01664 1189 Gene3D SET domain 334 648 IPR046341 -
Viun6g01664 1189 SMART preset_2 331 473 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Viun6g01664 1189 MobiDBLite consensus disorder prediction 60 85 - -
Viun6g01664 1189 MobiDBLite consensus disorder prediction 104 192 - -
Viun6g01664 1189 Pfam Pre-SET motif 335 481 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Viun6g01664 1189 Gene3D - 1 61 IPR043017 -
Viun6g01664 1189 PANTHER INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED 1 653 - -
Viun6g01664 1189 FunFam SET-domain containing protein lysine methyltransferase family protein 334 648 - -
Viun6g01664 1189 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 680 IPR025776 -
Viun6g01664 1189 MobiDBLite consensus disorder prediction 104 130 - -
Viun6g01664 1189 Pfam Ubiquitin-binding WIYLD domain 5 59 IPR018848 -
Viun6g01664 1189 Pfam Plant mobile domain 772 1096 IPR019557 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g01664 Viun-Chr6 24347587 24360197 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g01664 330 645 Su(var)3-9 homologs AT5G04940 28.869 4.97e-31 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Viun6g01664 PMD 1.6e-54 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g01664 - - vun:114188074 2425.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun6g01664 6 24347587 24360197 Viun7g01261 7 14347693 14355082 PCT