Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g01640 ATGCGTTTCCGTGCAAAAAGTCTCTTGTTTCTCGTCTGTGTTCTTGTTTTGTTGAAAGGCATTCGTGGGGCATGGAAGGAGGAGACAGGGTCTTTGATCTTGGGTTGTGGATTGGATGAAGGAGGTGCCGAAGATGCTGATGGAAGAAGATGGAGTTCTGATAAAAAGTTCTTGGCGACAAAAGGTGATTCAATCACATCCAAAGCCTCTTTCCAAGACCCTTCTCTTACGTCTGAGATTCCATACATGTCAGCACGCATTTTCAAATCTGAGACAACATACAAATTCCCCGTTGAACCTGACAAGCGTTATTGGCTCAGGCTCCATTTTTACCCCTCTCTTTATGCCAGTTTTGATACCAATGAGGCATATTTCTCCGTGGATGCAAATGGGGTTACCCTCCTCACCAATTTCAGCGCCTCAGTGACTTGTGAGGCCCTCTCACTAGCTTACATTGACAGAGAGTATTCCCTTTCTCCTCTGAGTTCAGATACCTTGACTCTCACTTTCAGGCCTTCTGATAAATACAGCGGTACATTCGCTTTTGTTAATGGCATTCAGCTTATCCAAATGCCCGATTTGTTTGAATCTGCACCAATGATAGGGTTTGATGACCAAACCATGGATATGACAACTATGAATCTTCAAACCATGTTTAGACTAAATGTCGGGGGCATCATATCTCCAGTCCAAGATTCGGGACTCACAAGGATGTGGTATGATGACACACCTTATATTTATGGGGCAGCCACCGGTGTGACCAACAAAGCTGAGAAGAATGTCACAATCAACTATCAGAGCATGGCAGAGTATATTGCTCCTGTTGATGTCTATTCCACATATAGATCAATGGGGGGAGATAAAAATCTCAACATGGGCTACAATCTCACTTGGATGTTCCATGTTGATACCAATGCCATGTACCTAGTAAGGTTGCATTTCTGTGATTTCTACTTCTCCAAGATCAATGAGATTGCGTTCAAAATCTTTGTGAACAACCAAACGGCACAAGCTCAAGCCGATGTGATTGGTTGGACAGGAGGCATAGGAGTGCCAACTTATAAGGACTATGTGATATATGTTGAAGGTGGAAAGAGTAATGAGTTGCTGTGGCTCGCACTTCACCCTGACCCTGAGACAAAGCCTGAGTTCTACGATGCCATACTCAATGGAGTGGAGATATTCAAGATCAATGAGACAGACTTATCTGCTCCCAATCCTCTGATTTCAGACTTGCTACTCAAACAGCACCAGGAGGAGGAAGCAGGTTTCTTCGTCCACAAAACAAGTCATCATACTGTTATCGGTGGAGCTGCAGGAGGTGCTGCTGGTTTTGCTTTTATGGCTGTGTTGTGTGTTGCTGTGTACAACAAGAAGAAGAAAGAACCAGGGTCAGAGGGTCAAACTGGCTGGCTTCCAATCTATTTAAGCTCAAACGGTAGCAAAATCAGCAAGTCTGGAAAGAGCGCGTGCAGTTCCACCTTGTCTGCCATGTCTCAAGGTCTTTGCCGATATTTCTCCTTGCAAGAGATAACGCAAGCAACCCAGAATTTTGATGAGTCTAACGTCATTGGGGTTGGTGGATTTGGAAAGGTTTACAAGGGTGTCATTGATAATGGAGTGAAGGTGGCAATCAAGAGGTCCAACCCACAGTCAGAACAAGGAGTTAATGAATTTCAAACGGAAATTGAGATGCTTTCCAAGCTGAGACACAAGCATTTGGTGTCCCTGATTGGTTTCTGCGAGGAACATAATGAGATGTGTTTGGTTTATGACTACATGGCTCTTGGCACCATGAGAGAGCATCTTTATAAGGGCAACAAACCTATGGCTACTCTGTCATGGAAGCAAAGGTTGGAGATTTGCATTGGAGCTGCAAAAGGGCTTCACTACCTTCACACTGGGGCAAAGTACACCATCATTCACAGAGATGTCAAAACAACAAACATTCTCCTGGATGAAAACTGGAATGCCAAGGTTTCAGATTTTGGCTTGTCAAAAACTGGTCCAAATATGAACACTGGTCATGTTAGCACTGTGGTGAAGGGTAGTTTTGGGTACTTGGATCCTGAATACTTCAGGAGGCAACAGTTGACTGAAAAATCTGATGTTTACTCATTTGGGGTTGTTCTGTTTGAAGCCCTGTGTGCCAGGCCTGTTCTCAATCCTAACCTTTCAAAGGAACAGGTTAGTCTTGCTGAATGGGCATTGCTTTGCAAGAAAAAAGGAACTCTGGAGGATATCATTGATCCTTCTCTCAAGGGAAATATCAATCCAGAAAGCTTGAAAAAGTTTGCAGACACGGCTGAGAAGTGTTTGTCCGATCATGGAGCTGCTCGTCCCTCCATGAATGATCTATTGTGGAATCTTGAATTTGCTCTCAATCTGCAAGAAAATGTCAATGGTGAGGGTGGTGCAACTAATTCTGCCCCTGCTGAGAAAAGTGAGTTCGAAGATATAATCTTGGCAGAAAAGGAGAGAGCACGCCTCTATAAAAACCTGAGCCTTGAAAGTGATATTGACATTAACAACGATTTGACAGACAATCACCAAGACTTCTCACAACTTGTCAGTCCGAAAGGACGATGA 2589 0.4384 MRFRAKSLLFLVCVLVLLKGIRGAWKEETGSLILGCGLDEGGAEDADGRRWSSDKKFLATKGDSITSKASFQDPSLTSEIPYMSARIFKSETTYKFPVEPDKRYWLRLHFYPSLYASFDTNEAYFSVDANGVTLLTNFSASVTCEALSLAYIDREYSLSPLSSDTLTLTFRPSDKYSGTFAFVNGIQLIQMPDLFESAPMIGFDDQTMDMTTMNLQTMFRLNVGGSXISPVQDSGLTRMWYDDTPYIYGAATGVTNKAEKNVTINYQSMAEYIAPVDVYSTYRSMGGDKNLNMGYNLTWMFHVDTNAMYLVRLHFCDFYFSKINEIAFKIFVNNQTAQAQADVIGWTGGIGVPTYKDYVIYVEGGKSNELLWLALHPDPETKPEFYDAILNGVEIFKINETDLSAPNPLISDLLLKQHQEEEAGFFVHKTSHHTVIGGAAGGAAGFAFMAVLCVAVYNKKKKEPGSEGQTGWLPIYLSSNGSKISKSGKSACSSTLSAMSQGLCRYFSLQEITQATQNFDESNVIGVGGFGKVYKGVIDNGVKVAIKRSNPQSEQGVNEFQTEIEMLSKLRHKHLVSLIGFCEEHNEMCLVYDYMALGTMREHLYKGNKPMATLSWKQRLEICIGAAKGLHYLHTGAKYTIIHRDVKTTNILLDENWNAKVSDFGLSKTGPNMNTGHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEALCARPVLNPNLSKEQVSLAEWALLCKKKGTLEDIIDPSLKGNINPESLKKFADTAEKCLSDHGAARPSMNDLLWNLEFALNLQENVNGEGGATNSAPAEKSEFEDIILAEKERARLYKNLSLESDIDINNDLTDNHQDFSQLVSPKGR 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g01640 863 Gene3D Transferase(Phosphotransferase) domain 1 595 809 - -
Viun6g01640 863 Pfam Malectin-like domain 35 398 IPR024788 -
Viun6g01640 863 CDD STKc_IRAK 525 792 - -
Viun6g01640 863 ProSitePatterns Serine/Threonine protein kinases active-site signature. 641 653 IPR008271 GO:0004672|GO:0006468
Viun6g01640 863 FunFam FERONIA receptor-like kinase 31 192 - -
Viun6g01640 863 PANTHER OS07G0166700 PROTEIN 503 798 IPR045272 GO:0004714|GO:0006468
Viun6g01640 863 FunFam FERONIA receptor-like kinase 213 399 - -
Viun6g01640 863 Gene3D - 213 399 - -
Viun6g01640 863 Gene3D - 34 192 - -
Viun6g01640 863 ProSiteProfiles Protein kinase domain profile. 519 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun6g01640 863 SMART serkin_6 519 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun6g01640 863 FunFam receptor-like protein kinase FERONIA 482 594 - -
Viun6g01640 863 FunFam Receptor-like protein kinase FERONIA 595 810 - -
Viun6g01640 863 ProSitePatterns Protein kinases ATP-binding region signature. 525 547 IPR017441 GO:0005524
Viun6g01640 863 Gene3D Phosphorylase Kinase; domain 1 478 594 - -
Viun6g01640 863 Pfam Protein tyrosine and serine/threonine kinase 523 787 IPR001245 GO:0004672|GO:0006468
Viun6g01640 863 SUPERFAMILY Protein kinase-like (PK-like) 494 794 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g01640 Viun-Chr6 24201565 24204875 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g01640 21 863 Receptor kinase-like Gene Family AT3G51550 52.169 0.0 844
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Viun6g01640 Malectin_like 5.1e-35 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g01640 - - gmx:102659961 1337.01