Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g01630 ATGGAAAGGGTGTTGTCAGTGGATGAAATATCGGAGCAATATTGGGTGGCGGCGAAGAAGGAATCATGCAAGTCAAAGTCAAAGATGAACCGTAGTGAATCGGAGTGGGCATTTCAGCAGTTCCTGCAGGAAGCAGCTTCTCCATCTTCATCTTCTTCCTCCGATGTTAAACCCGAAAAGGATCCCGACATCAACATGAACATAACACTAAATGTCGATTCCCACGATTACCAAACTATTCTTAAAACCAAGCTTAACCTCGCTTGTGCTGCTGTCGCTTTGACCCGGGGATCTCTGGTCAAATCTCAAAATCCGACCACTTTCCCTGACAGTGGATCTGTTCCTTCTGAAGTTGGAGCCTTAAAAGATGTGAAAGGAGCAACTGGGATTTGTTTCTCACCTTTCCTGCAGAAGAAAGGCGTTGTTGCAGTGAGGCCAACAATGAGTGGATCTTCAAGAGAGCAATCAGAGGATGAGGAAGCAGAGGAAGAGATTAACATGACTGGAAACATGAATCCAACTGATGCAAAACGAGTAAGGAGGGAGTCTGCTAGACGCTCAAGAAGAAGAAAGCAGGCTCATTTAACTGAGCTGGAGACACAGGTATCCCAATTAAGAGGTGAAAATTCTTCTTTGTTAAAGCGCTTAACTGATGTGAGCCAGAGATACAATAGTGCTTCAATTGACAACAGAGTATTGAAAGCTGATGTTGAAACGTTAAGAGCCAAGGTGAAGATGGCTGAAGAGACGGTGAAAAGAATTTCTGGGTTGAACCCAATGTTTCATGCCATGACTGAGATGTCATCAATGGAGATACCATTGTTTGATGAAAGTCCTTCTGATACATCCGCTGGTGCTGCTGTTCCTGTGCAAGAAGATCCAAATCATCAACTTTGTCAAGCCACTGGGGGAGCAAATTCCCTGCATAGAGTTGCTAGCTTGGAACATCTTCAGAAGCGGATTCGTGGTGATGAAGATTCACGACAAGAACAATAA 996 0.4428 MERVLSVDEISEQYWVAAKKESCKSKSKMNRSESEWAFQQFLQEAASPSSSSSSDVKPEKDPDINMNITLNVDSHDYQTILKTKLNLACAAVALTRGSLVKSQNPTTFPDSGSVPSEVGALKDVKGATGICFSPFLQKKGVVAVRPTMSGSSREQSEDEEAEEEINMTGNMNPTDAKRVRRESARRSRRRKQAHLTELETQVSQLRGENSSLLKRLTDVSQRYNSASIDNRVLKADVETLRAKVKMAEETVKRISGLNPMFHAMTEMSSMEIPLFDESPSDTSAGAAVPVQEDPNHQLCQATGGANSLHRVASLEHLQKRIRGDEDSRQEQ 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g01630 331 Pfam Basic leucine-zipper C terminal 239 298 IPR020983 -
Viun6g01630 331 MobiDBLite consensus disorder prediction 43 62 - -
Viun6g01630 331 Coils Coil 230 250 - -
Viun6g01630 331 Coils Coil 181 215 - -
Viun6g01630 331 PANTHER BASIC LEUCINE ZIPPER 63 1 325 - -
Viun6g01630 331 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 181 224 IPR004827 GO:0003700|GO:0006355
Viun6g01630 331 Pfam bZIP transcription factor 181 222 IPR004827 GO:0003700|GO:0006355
Viun6g01630 331 Gene3D - 178 226 - -
Viun6g01630 331 SUPERFAMILY Leucine zipper domain 181 222 IPR046347 GO:0003700|GO:0006355
Viun6g01630 331 CDD bZIP_plant_GBF1 187 224 IPR045314 GO:0003700|GO:0006355
Viun6g01630 331 SMART brlzneu 173 232 IPR004827 GO:0003700|GO:0006355
Viun6g01630 331 MobiDBLite consensus disorder prediction 146 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g01630 Viun-Chr6 24120985 24123502 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g01630 1 261 bZIP Transcription Factor Family AT4G02640 38.961 2.35e-45 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Viun6g01630 bZIP_C 8.8e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g01630 K25784 - gmx:778137 405.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun6g01630 6 24120985 24123502 Viun6g01630 6 24120985 24123502 ECH
Viun6g01630 6 24120985 24123502 Viun7g02217 7 26632329 26639791 PCT