Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g01629 ATGGAAAGGGTGTTGTCAGTGGATGAAATATCGGAGCAATATTGGGTGGCGGCGAAGAAGGAATCATGCAAGTCAAAGTCAAAGATGAACCGTAGTGAATCGGAGTGGGCATTTCAGCAGTTCCTGCAGGAAGCAGCTTCTCCATCTTCATCTTCTTCCTCCGATGTTAAACCCGAAAAGGATCCCGACATCAACATGAACATAACACTAAATGTCGATTCCCACGATTACCAAACTATTCTTAAAACCAAGCTTAACCTCGCTTGTGCTGCTGTCGCTTTGACCCGGGGATCTCTGGTCAAATCTCAAAATCCGACCACTTTCCCTGACAGTGGATCTGTTCCTTCTGAAGTTGGAGCCTTAAAAGATGTGAAAGGAGCAACTGGGATTTGTTTCTCACCTTTCCTGCAGAAGAAAGGCGTTGTTGCAGTGAGGCCAACAATGAGTGGATCTTCAAGAGAGCAATCAGAGGATGAGGAAGCAGAGGAAGAGATTAACATGACTGGAAACATGAATCCAACTGATGCAAAACGAGTAAGGAGGATGCTTTCTAATAGGGAGTCTGCTAGACGCTCAAGAAGAAGAAAGCAGGCTCATTTAACTGAGCTGGAGACACAGGTATCCCAATTAAGAGGTGAAAATTCTTCTTTGTTAAAGCGCTTAACTGATGTGAGCCAGAGATACAATAGTGCTTCAATTGACAACAGAGTATTGAAAGCTGATGTTGAAACGTTAAGAGCCAAGGTGAAGATGGCTGAAGAGACGGTGAAAAGAATTTCTGGGTTGAACCCAATGTTTCATGCCATGACTGAGATGTCATCAATGGAGATACCATTGTTTGATGAAAGTCCTTCTGATACATCCGCTGGTGCTGCTGTTCCTGTGCAAGAAGATCCAAATCATCAACTTTGTCAAGCCACTGGGGGAGCAAATTCCCTGCATAGAGTTGCTAGCTTGGAACATCTTCAGAAGCGGATTCGTGGTGATGAAGATTCACGACAAGAACAATAA 1011 0.4411 MERVLSVDEISEQYWVAAKKESCKSKSKMNRSESEWAFQQFLQEAASPSSSSSSDVKPEKDPDINMNITLNVDSHDYQTILKTKLNLACAAVALTRGSLVKSQNPTTFPDSGSVPSEVGALKDVKGATGICFSPFLQKKGVVAVRPTMSGSSREQSEDEEAEEEINMTGNMNPTDAKRVRRMLSNRESARRSRRRKQAHLTELETQVSQLRGENSSLLKRLTDVSQRYNSASIDNRVLKADVETLRAKVKMAEETVKRISGLNPMFHAMTEMSSMEIPLFDESPSDTSAGAAVPVQEDPNHQLCQATGGANSLHRVASLEHLQKRIRGDEDSRQEQ 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g01629 336 Pfam Basic leucine-zipper C terminal 244 303 IPR020983 -
Viun6g01629 336 MobiDBLite consensus disorder prediction 146 173 - -
Viun6g01629 336 Gene3D - 176 231 - -
Viun6g01629 336 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 180 195 IPR004827 GO:0003700|GO:0006355
Viun6g01629 336 CDD bZIP_plant_GBF1 178 229 IPR045314 GO:0003700|GO:0006355
Viun6g01629 336 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 175 229 IPR004827 GO:0003700|GO:0006355
Viun6g01629 336 SMART brlzneu 173 237 IPR004827 GO:0003700|GO:0006355
Viun6g01629 336 Coils Coil 186 220 - -
Viun6g01629 336 Coils Coil 235 255 - -
Viun6g01629 336 Pfam bZIP transcription factor 176 226 IPR004827 GO:0003700|GO:0006355
Viun6g01629 336 SUPERFAMILY Leucine zipper domain 177 227 IPR046347 GO:0003700|GO:0006355
Viun6g01629 336 MobiDBLite consensus disorder prediction 43 62 - -
Viun6g01629 336 FunFam BZIP transcription factor 175 226 - -
Viun6g01629 336 PANTHER BASIC LEUCINE ZIPPER 63 1 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g01629 Viun-Chr6 24120985 24123502 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g01629 1 266 bZIP Transcription Factor Family AT4G02640 40.584 6.81e-49 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Viun6g01629 bZIP_C 9e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g01629 K25784 - gmx:778137 418.698