Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g01614 ATGGGAAAAGCCAGCAAATGGATCAGGAACTTTCTTCTGGGGAAAAAAGATGAGAAAATCAAGAAGATCGATGCATCTGAGGATAGTAAGAGTTCCAACACGGGAAGTTTGATTGTGAGTCCAAAAGTGAAGCGCAGATGGAGCTTTGGAAAACTAACAGGTGGAAGAATAACGAGCAAGATAGTAGGGCATAAATTTTCCAGGTCTTTTGACTCAGGTGAGTCTGCAAAACTGCAAATACAAGCCTTGTTGGAAACAAAGGCTTCGAGGCGTCTTCCAACACCACTGCCAAGAAGTTATAAAGATAAAAACAAAGCTGCTACAAAGATTCAGGCCGGTTTTCGCTCATATTTGGCAAAGAGAGCATTGCATGCTTTAAGGGGATTAGTAAAGTTACAAGCACTAGTGAGGGGTCACCTTGTGAGGAAACAAACAACTGCTACACTGCGTGGAATGCATGCGCTGATGGCGATACAAGTTAGAGCGCGAATTCACCGAATTCAAATGGCAGATGAAGTAAACCTCCTTGGAAAACAGCCTCCACAACATAGAGAAGTTGCACACTTCAGAGACCTAGCAACAGAAGAAAATAAAGATTCAAAGGATATGAGTGTGGAAGAAATGTTGGAGGCTTTGAAAAGCAGAAGTGGCCCTCTAGATGGTTCATATGTTAAGGCCAGAGAACGTGATTCCATGACATTCTATTCCAAGCATGTGCCGGTTGTTTCCAAACGAAAACATCAATACAAGAATACTCAAATCGTAGAACCAAACAGCCCAGAGAACTTCCGGGTCATGTCTGGATTTAACACAACGGCAATGGCCGCCTTATCAACTTCTCAGCGTCACTCGGTGCCTCACCGCCAATCACTGTCACCAAATTACATGAACAAGACAGAATCTTCAAGGGCCAAAGCAAGGTCGCAGAGTGAACCAAGACAGCGACCCAAAAGGGGAATGAGGAACAAAGGGAAGTCTGTGGAATCTCCATTGAATGGTCCAAGACAAAATCTGTTCTCAAACTCATTACGTTTCGATCATGGAAGCTTGGATCTTTGGTCTAGCAATCTTCGTGGGGACAGCAAGCGCGATTCCTTTGGCAGCAGCTCGGTCACTACTGATTCCTATTATTGA 1134 0.4409 MGKASKWIRNFLLGKKDEKIKKIDASEDSKSSNTGSLIVSPKVKRRWSFGKLTGGRITSKIVGHKFSRSFDSGESAKLQIQALLETKASRRLPTPLPRSYKDKNKAATKIQAGFRSYLAKRALHALRGLVKLQALVRGHLVRKQTTATLRGMHALMAIQVRARIHRIQMADEVNLLGKQPPQHREVAHFRDLATEENKDSKDMSVEEMLEALKSRSGPLDGSYVKARERDSMTFYSKHVPVVSKRKHQYKNTQIVEPNSPENFRVMSGFNTTAMAALSTSQRHSVPHRQSLSPNYMNKTESSRAKARSQSEPRQRPKRGMRNKGKSVESPLNGPRQNLFSNSLRFDHGSLDLWSSNLRGDSKRDSFGSSSVTTDSYY 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g01614 377 MobiDBLite consensus disorder prediction 276 377 - -
Viun6g01614 377 Pfam IQ calmodulin-binding motif 130 144 IPR000048 GO:0005515
Viun6g01614 377 Pfam IQ calmodulin-binding motif 105 123 IPR000048 GO:0005515
Viun6g01614 377 Pfam Protein of unknown function (DUF4005) 259 323 IPR025064 -
Viun6g01614 377 SMART iq_5 125 146 IPR000048 GO:0005515
Viun6g01614 377 SMART iq_5 102 124 IPR000048 GO:0005515
Viun6g01614 377 MobiDBLite consensus disorder prediction 329 377 - -
Viun6g01614 377 ProSiteProfiles IQ motif profile. 103 131 IPR000048 GO:0005515
Viun6g01614 377 ProSiteProfiles IQ motif profile. 127 154 IPR000048 GO:0005515
Viun6g01614 377 Gene3D - 101 155 - -
Viun6g01614 377 MobiDBLite consensus disorder prediction 304 324 - -
Viun6g01614 377 PANTHER IQ-DOMAIN 5-RELATED 1 334 - -
Viun6g01614 377 MobiDBLite consensus disorder prediction 276 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g01614 Viun-Chr6 24033111 24034996 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g01614 1 355 IQD Protein Family AT4G14750 33.516 7.16e-36 134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun6g01614 6 24033111 24034996 Viun6g01614 6 24033111 24034996 ECH