Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g01595 ATGGCTTCTCTAGAGTTTACAGTGCGAAGGTGCCAACCTCAGCTGGTGTCTCCTGCTATTCCCACCCCTCACGAAGTTAAGCTACTTTCCGACATTGATGATCAAGAGGGTCTGCGTTTCCACGTTCCATGGATACAAATTTATCGAATGCAAGCATCAATGGCAGAGAAAGACCCAGTTCAAGTGATTCGACAAGCACTGTCACAAACACTTGTCTTCTATTACCCATTTGCGGGTAGGCTTAGAGAGGGGCCTCACCGCAAATTGATGGTGGATTGCACCGGAGAAGGTGTCATGTTCATCGAGGCTCATGCTGACGTCACACTTGATGAGTTCGGTGATTCTCTCCACCCTCCATTCCCATGCTTCCATGAACTTCTATACCATGTTCCTGGTTCACAACAAGTTACCAACACTCCCATTCTACTCGTACAGGTGACACGCCTTAGGTGCGGTGGTTTCATCTTGGCCTTCTCCTTCAACCACACCATCTGTGATGGAGCTGGTCTTTCACAATTCATGAGCACGTGGGCTGAAATGGCTCGTGGTGCAACCAAACCTTCCATTCCACCGGTTTGGCGTAGGGAGCTTCTAATGGCAAGAGACCCACCTCGCATCACATGCAACCATCGCGAATACGAGCATGTCCCAGACACAGTCAAAGGAACCGTCACATCAAACGAACATGACATGGTTCTTCGGTCGTTCTTCTTTGGACCTTCCCAAATAGCCGCTATTCGTGGCTTGGTTCCACCCCACCTTCAGCACTGTTCCACGTTTGATCTCATCACAGCATGTTTGTGGCGCTGTCGCACAAAAGCGTTGGAGATAGAGGCAGAAGAGGAGGTTCGCATGATGGTGATAGTGAACGCACGTGCAAAGTTCAATCCTCCTTTACCCGTTGGTTACTACGGCAATGCTTTTGCGTACCCTGCAGCAGTTGCAACTGCAGGGAAGCTTTGTGAGAATCCAATTGGGTACGCAGTGGAGTTGATAAAGAAAGCGAAAGGCGAGGTGACAGAAGAGTACGTGCATTCGGTGGCAGATTTGATGGTGATTAAGGATGGGTGCACATTTACGCCCATAAGATCTTGTCTTATTTCGGATTTGAGTCGTGGGAGGTTCAGGGAAGTGGATTTTGGGTGGGGTGAGGGTGTGTATGGAGGAGTGGCTGAAGGTGGGGCTGGGAGGTTTGTTGGAGCAACGTATCAGGTGTTGCATAAGAATGGAAGGGGAGAAGAAGGCATAGTCTTACCAATTTGGTTGCCTGCTGAAGCTATGGATAGGTTTGCAGATGAGTTGGATCACATGTTTGGGAACCAAAACCAAACTACAATAACTACTCTTTATTTCCCGAGGTCTACCTTATAG 1371 0.488 MASLEFTVRRCQPQLVSPAIPTPHEVKLLSDIDDQEGLRFHVPWIQIYRMQASMAEKDPVQVIRQALSQTLVFYYPFAGRLREGPHRKLMVDCTGEGVMFIEAHADVTLDEFGDSLHPPFPCFHELLYHVPGSQQVTNTPILLVQVTRLRCGGFILAFSFNHTICDGAGLSQFMSTWAEMARGATKPSIPPVWRRELLMARDPPRITCNHREYEHVPDTVKGTVTSNEHDMVLRSFFFGPSQIAAIRGLVPPHLQHCSTFDLITACLWRCRTKALEIEAEEEVRMMVIVNARAKFNPPLPVGYYGNAFAYPAAVATAGKLCENPIGYAVELIKKAKGEVTEEYVHSVADLMVIKDGCTFTPIRSCLISDLSRGRFREVDFGWGEGVYGGVAEGGAGRFVGATYQVLHKNGRGEEGIVLPIWLPAEAMDRFADELDHMFGNQNQTTITTLYFPRSTL 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g01595 456 Gene3D - 215 433 IPR023213 -
Viun6g01595 456 Pfam Transferase family 11 436 - -
Viun6g01595 456 Gene3D - 2 214 IPR023213 -
Viun6g01595 456 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 14 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g01595 Viun-Chr6 23886293 23888116 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g01595 15 389 Monolignol Biosynthesis Gene Families AT5G48930 30.052 9.71e-51 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g01595 K19861 - gmx:100792864 644.039