Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g01594 ATGGCCTCATCTTCTTCTTCTTCTCTACAGTTCACCGTGCGAAGATGCGAACCCCAGCTGGTCCCTCCAGCTATCCCCACTCCTCATGAAATTAAGCTACTTTCCGACATCGATGATCAAGAAGGCCTTCGTTTTCACGTTCCATTCATACAAATTTATCCAAAGCAAACATCAATGGCAGAGAAAGACCCAGTTCAAGTCATTCGCCAAGCACTGTCACAAACACTTGTCTTCTATTACCCATTTGCCGGTAGGCTTAGGGAGGGTCCTCGCCGTAAATTGATGGTGGATTGCACCGGAGAAGGTGTCATGTTCATCGAGGCTGATGCTGACGTCACACTCGATCAGTTCGGTGATTCTCTCCACCCTCCATTCCCATGCTTCCATGAACTGCTATACCATGTTCCTGGTTCACACCAAAGTACAAACACTCCCCTTCTACTTGTACAGGTGACACGGCTAAAGTGCGGTGGTTTCATCTTGGCCTTCTCCTTCAACCACACCATCTGTGATGGAGCTGGTCTTTCACAATTCATGAGCACGTGGGCTGCAATGGCACGTGGTGCAACCAAACCTTCCATTCCACCGGTTTGGCGTAGGGAGCTTCTAATGGCAAGAGACCCACCTCGCATCACATGCAACCATCGCGAATACGAACATGTCCCAGACACAGTCAAAGGAACCGTCTCATCAAACGACCATGACATGGTTCTTCGGTCGTTCTTCTTTGGACCTTCCCAAATAGCCGCTATTCGTGGCTTGGTTCCACCCCACCTTCAGCACAGTTCCACGTTTGATCTCATCACAGCATGCTTCTGGCGCTGTCGTACAAAAGCGTTGGAGATAGAGGCAGAAGAGGAGGTTCGCATGATGGTGATAGTGAACGCACGTGCAAAGTTCAATCCTCCTTTACCTGTTGGTTACTACGGCAATGCTATTGCATACCCTGCAGCAGTCACAACTGCAGGGAAGCTTTGTGAGAATCCGTTTGGGTACGCAGTGGAGTTGATAAAGAAAGTGAAAGGTGAGGTGACAGAGGAGTACGTGCATTCGGTGGCAGATTTGATGGTGATTAAGGATCGGTGCACGTTTACAACTGTGAGGTCTTGTATTATTTCGGATTTGAGACGTTTGAAGCTTAGAGAAGCGGATTTTGGGTGGGGTGAGGGTGTTTATGGTGGAGTGGCTGAAGGTGGAGCTGGGAGGTTTCTTGGAGCAACCTATCAGGTTTTGCATAAAAATAGAAATGGAGAAGAAGGCATCATCTTACCAATCTGGTTGCCTGCTGAAGCTATGAATAGGTTTGCAAAAGAGTTGGATCACATGTTTTGGAACCAAAACCAAACTAAAATATGGAGTCCTAGTTTAATCAAGTCTACCTTATAG 1386 0.4762 MASSSSSSLQFTVRRCEPQLVPPAIPTPHEIKLLSDIDDQEGLRFHVPFIQIYPKQTSMAEKDPVQVIRQALSQTLVFYYPFAGRLREGPRRKLMVDCTGEGVMFIEADADVTLDQFGDSLHPPFPCFHELLYHVPGSHQSTNTPLLLVQVTRLKCGGFILAFSFNHTICDGAGLSQFMSTWAAMARGATKPSIPPVWRRELLMARDPPRITCNHREYEHVPDTVKGTVSSNDHDMVLRSFFFGPSQIAAIRGLVPPHLQHSSTFDLITACFWRCRTKALEIEAEEEVRMMVIVNARAKFNPPLPVGYYGNAIAYPAAVTTAGKLCENPFGYAVELIKKVKGEVTEEYVHSVADLMVIKDRCTFTTVRSCIISDLRRLKLREADFGWGEGVYGGVAEGGAGRFLGATYQVLHKNRNGEEGIILPIWLPAEAMNRFAKELDHMFWNQNQTKIWSPSLIKSTL 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g01594 461 Gene3D - 7 220 IPR023213 -
Viun6g01594 461 Pfam Transferase family 16 442 - -
Viun6g01594 461 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 20 440 - -
Viun6g01594 461 Gene3D - 233 443 IPR023213 -
Viun6g01594 461 SUPERFAMILY CoA-dependent acyltransferases 130 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g01594 Viun-Chr6 23880952 23882745 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g01594 44 439 Monolignol Biosynthesis Gene Families AT5G48930 30.318 3.93e-51 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g01594 K19861 - pvu:PHAVU_006G098400g 655.981