Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g01593 ATGGCTTCATCATCTCCCTCTCCACCGTTTACGATGCATAAGTGCAAACCTGAGCTTGTGGCTCCTTCAATACCCACTCCCGACGAAACTAAACTACTATCTGAAATAGATGATCAAAACTACCTCCGTTTCCATTATTCAATCATACAAATCTATCAAAATGAATCATCAATGGCGAATAAAGACCCGGTAAGAGTGATTCGGCAGGCACTGGCACAAGCACTTGTTTTCTATTACCCATTTGCGGGTAGGCTCAGGGAGGGTCGTGCCCACAAATTAATGGTGGATTGCACCGGAGAAGGTGTCATGTTCGTTGAGGCTGATGCTGACGTAACACTCGATCAGTTTGGTGATAATCTTCAACCTCCATTCATACACTCTAAGTCATTTATGTGTGATGTTGCAGAATCCGAAGATATTAAAAATCTGCCTCTTCTACTCATCCAGGTGACAAGACTCAAGTGTGGTGGTTTCGTGGTGTCGACAGGGTGGAACCACGTGATGGCAGACGGAGCTGGTTTGTCACAGTTCATGCAAGCATGGGCTGAAATGGCACGAGGTATAAAGACTCCTTCGATCTCACCTCTCTGGAGAAGGGAGCTCCTAATGGCAAGAGATCCACCTCGCATTACATGCAACCATCGTGAATACGACCAAATCCAAGACAACCTCAGTTCCTCCGACCTCGACCTGGTTCATCGATCATTCTTCTTCGGACCTACTCAGATGGCTGCCCTTCGTGGCTCGCTTCCCCGTGAGCTTCGACAGTGCACCGCATTCGATCTCATCACGGCGTGCTTCTGGCGTTGCCGCACAAGAGCACTGCAAATAGACCCAAACGAGGATGTTCGCATGATGTGCATCGTGAACGCGCGTAACAGGTTCCGTCCTCCGTTACCTGTTGGTTACTACGGCAACGCTTTTGCATACCCCGCCGCAATGGCCACCGCCGGGAAGCTCTGCGCAAATCCATACGCGTATGCGGTGGAGTTGATTCACAATGTGAAGGGTGCGGTGACGGAGGAGTATATGCATTCGGTGGCGGATCTGATGGTGCTTAAGGGACGGTGCATGCCCACAACGGTAAGGTCTTGTTTGGTGTCGGATCTGACTCGTGCTAGGTTCAGGGACGTGGATTTTGGGTGGGGCAAGGCTTTGTCTGGTGCACCAGCCAAAGGTAGCACTGGACCCTTTTACGGAGGAACACACATTGTGTCGTATAAGAATTCGAACGGAGTAGATGGGTTGGTGTTACCGGTTTGGATGCCCGCAAAAGCCATGCCCATGTTTGTGAAAGAGATGGAAGATCTGATGAGTGGCAACCAAAAACAGCTGAACCACCCTACAAAAACTGCTGCTTTTATCAGGTCTACCATGTAG 1380 0.4971 MASSSPSPPFTMHKCKPELVAPSIPTPDETKLLSEIDDQNYLRFHYSIIQIYQNESSMANKDPVRVIRQALAQALVFYYPFAGRLREGRAHKLMVDCTGEGVMFVEADADVTLDQFGDNLQPPFIHSKSFMCDVAESEDIKNLPLLLIQVTRLKCGGFVVSTGWNHVMADGAGLSQFMQAWAEMARGIKTPSISPLWRRELLMARDPPRITCNHREYDQIQDNLSSSDLDLVHRSFFFGPTQMAALRGSLPRELRQCTAFDLITACFWRCRTRALQIDPNEDVRMMCIVNARNRFRPPLPVGYYGNAFAYPAAMATAGKLCANPYAYAVELIHNVKGAVTEEYMHSVADLMVLKGRCMPTTVRSCLVSDLTRARFRDVDFGWGKALSGAPAKGSTGPFYGGTHIVSYKNSNGVDGLVLPVWMPAKAMPMFVKEMEDLMSGNQKQLNHPTKTAAFIRSTM 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g01593 459 Gene3D - 9 214 IPR023213 -
Viun6g01593 459 Pfam Transferase family 15 436 - -
Viun6g01593 459 PANTHER ACYL TRANSFERASE 4 10 437 - -
Viun6g01593 459 Gene3D - 215 434 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g01593 Viun-Chr6 23860310 23866100 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g01593 19 432 Monolignol Biosynthesis Gene Families AT5G48930 29.302 2.18e-53 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g01593 K19861 - gmx:100792864 598.201