Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g01592 ATGGCCTCATCATCATCTTCTTCCTCTTCTCTAAACTTTACAGTGCGAAGGTGCGAACCAGAGCTGGTGCCTCCTGCTATCCCCACTCCTCATGAAGTTAAACTACTTTCAGACATTGATGATCAAGATGGTCTGCGTTTCCACGTTCCAATGGTACAAATTTATCGAAAAAAAGAATCAATGGCAGAGAAAGACCCAGTTCAAGTGATTCGACAAGCACTGTCACAAACACTTGTCTTCTATTACCCATTTGCGGGTAGGCTCAGAGAGGGGCCTCACCGCAAATTGATGGTGGATTGCACCGGAGAAGGTGTCATGTTCATCGAGGCTGATGCTGACGTCACACTCGATCAGTTCGGCGATTCTCTTCAGCCTCCATTCCCATGCTACCAAGAACTGCAATACGAAGTTCCTGGCTCACAAGAAATTACCAACACTCCCCTTCTACTTGTACAGGTGACTCGACTCAAGTGTGGTGGTTTCTTCTTAGCCATCCGCCTTAACCACACGATGTGTGACGGACCCGGTTACCAACAATTCTTGAGCGCTTGGGCCGAAATGGCTAGAGGTGCAACCAAACCTTCCATTGCACCAGTGTGGCGTAGGGAGCTCCTAATGGCAAGAGACCCACCTCGCATCACATGCAACCATCGCGAATACGAACAAGTTCCAGACACAGTCAAAGGAACCGTCACACCAAACCAAGATGACATGGTTCAGCGGTCGTTCTTCTTTGGACCCCTCGACATAGCTGCACTTCGGCGCTTGATTCCCCAACACCTTCGGCACTGCACCACATTCGATCTCATCACAGCATGTTTGTGGCGCTGTCGCACAAAAGCGCTGCAGATAGAGGCAGACGAGGATGTCCGCATGATGTGCGTAGTCAACGCACGTGGTCAGTTCAATTCCCCACTACCCGTGGGTTACTACGGCAACGGTTTTGCATATCCGGCGGCGGTAACCACCGCAGGGAAGCTTTGCGGAAAGCCGTTTGGGTATGCGGTGGAGCTGATAAATAAAGTGAAAGGTGAGATGACAGAAGAGTACCTGCAATCTGTTGCAGACCTGATGGTGATGAAGGGACGATGCTTATTCACCACTGTGAGGTCTTGTATTGTGTCACATTTGGCACGTTTTAACATTAGAGAAGTGGATTTTGGGTGGGGTGAGGGTGTGTATGCTGGAGTCGCCCAAGCTGGGGGTGGGAGCTTTCCAGGCATTTCGTTTTTCTGTTCTGCTAAGAATGGAAAAGGAGAAGAAGGTATAGTATTTCCGATTTGTTTACCTGCTGCAGCTATGGAGAGGTTTTCCCAAGAGTTTAACCACATGCTACGCAACAAAAACCAACCTCAAACCACTTCTGCTACTTTAATAATGTCTAACCTGTAA 1392 0.4885 MASSSSSSSSLNFTVRRCEPELVPPAIPTPHEVKLLSDIDDQDGLRFHVPMVQIYRKKESMAEKDPVQVIRQALSQTLVFYYPFAGRLREGPHRKLMVDCTGEGVMFIEADADVTLDQFGDSLQPPFPCYQELQYEVPGSQEITNTPLLLVQVTRLKCGGFFLAIRLNHTMCDGPGYQQFLSAWAEMARGATKPSIAPVWRRELLMARDPPRITCNHREYEQVPDTVKGTVTPNQDDMVQRSFFFGPLDIAALRRLIPQHLRHCTTFDLITACLWRCRTKALQIEADEDVRMMCVVNARGQFNSPLPVGYYGNGFAYPAAVTTAGKLCGKPFGYAVELINKVKGEMTEEYLQSVADLMVMKGRCLFTTVRSCIVSHLARFNIREVDFGWGEGVYAGVAQAGGGSFPGISFFCSAKNGKGEEGIVFPICLPAAAMERFSQEFNHMLRNKNQPQTTSATLIMSNL 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g01592 463 Gene3D - 234 447 IPR023213 -
Viun6g01592 463 Gene3D - 12 222 IPR023213 -
Viun6g01592 463 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 21 437 - -
Viun6g01592 463 Pfam Transferase family 18 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g01592 Viun-Chr6 23850476 23853043 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g01592 46 439 Monolignol Biosynthesis Gene Families AT5G48930 30.958 5.05e-55 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g01592 K19861 - pvu:PHAVU_006G098400g 733.791