Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g01591 ATGGCCTCATCATTTTCTTCTTCTTCATCTTCTCTAAAGTTTACGGTGCGAAGGTGCGAACCACAGCTGGTGCGTCCTGCTATTCCCACTCCTCACGAAGTTAAGTTACTTTCCGACATTGATGATCAAGAAGGTTTGCGTTTCCACCTTCCAATGATACAAATTTATCGAAAGCAAACATCAATGGCAAAGAAAGACCCAGTTCGAGTGATTCGACAAGCGCTGTCACAAACACTTGTCTTCTATTACCCGTTTGCGGGTAGGCTTAGGGAGGGACCTCGCCGCAAATTGATGGTGGATTGCACCGGAGAAGGTGCCATGTTCATTGAGGCTGACGCTGACGTCACGCTTGACCAGTTCGGAGATTCTCTCCTCCCTCCATTCCCATGCTTCCATCAACTGCTATACCATGTTCCTGGTTCACAACAAATTACCGATACTCCCCTTCTACTTGTACAGGTGACACGTCTTAGCTGCGGCGGTTTCATCTTGGCCTTCTCCTTCAACCACACCATGTGTGACGGAGATGGTCTTTCACAATTCATGAACACCTGGGCTGAAATGGCTCGTGGAGCAACCAAACCTTCCATTGCACCAGTGTGGCGTAGGGAGCTTCTAATGACAAGAGACCCACCTCGCATCACATGCAACCACCGTGAATACATGCAGATCCCTCACAATATGACACCGACCACCTTCATTCCATACGAGAACCACATGGTTCTTCGATCGTTCTTCTTCGGACCTTCCCGAGTAGCCGCTATTCGTGGCTTGGTTCCACCTCACCTTCAGCACTGTTCCACGTTTGATCTCATCACAGCATGCTTCTGGCGCTGTCGTACAAAAGCGTTGCAGATAGAGGCAGAAGAGGAGGTTCGCATGATGGTGATAGTGAACGCACGTGCAAAGTTCAATCCTCCTTTACCCGTTGGTTACTACGGCAATGCTTTTGCGTACCCTGCAGCAGTTACCACCGCAGGGAAGCTTCGTGAGAATCCGTTTGGGTATGCAGTGAATTTGATAAATAAAGTGAAGGGTGAGGTGACAGAAGAGTACATGCATTCTGTGGCGGATCTCATGGTGAATAAGGGGCAATACATACCTGTAACTGAAAGGTCTTTCATGGTGTCAGATTTGAGATATTTTGGATCGAGAGAAACTGATTTTGGTTGGGGTGATGCTGCGTATGGTGGAGTAGCCAAAGGAGGACTTGGGCCATTTCCTGCAGTAACATTTGTGGTTCCTTTTAAGAATGCAAAAGGTGAAGAAGGTGTAGTATTACCCATTTGGTTGCCCCCGGAAGCTATGAACAGGTTTACCAAAGAGTTGGGTACGTGCGTGCTTTGA 1347 0.4803 MASSFSSSSSSLKFTVRRCEPQLVRPAIPTPHEVKLLSDIDDQEGLRFHLPMIQIYRKQTSMAKKDPVRVIRQALSQTLVFYYPFAGRLREGPRRKLMVDCTGEGAMFIEADADVTLDQFGDSLLPPFPCFHQLLYHVPGSQQITDTPLLLVQVTRLSCGGFILAFSFNHTMCDGDGLSQFMNTWAEMARGATKPSIAPVWRRELLMTRDPPRITCNHREYMQIPHNMTPTTFIPYENHMVLRSFFFGPSRVAAIRGLVPPHLQHCSTFDLITACFWRCRTKALQIEAEEEVRMMVIVNARAKFNPPLPVGYYGNAFAYPAAVTTAGKLRENPFGYAVNLINKVKGEVTEEYMHSVADLMVNKGQYIPVTERSFMVSDLRYFGSRETDFGWGDAAYGGVAKGGLGPFPAVTFVVPFKNAKGEEGVVLPIWLPPEAMNRFTKELGTCVL 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g01591 448 Gene3D - 10 223 IPR023213 -
Viun6g01591 448 Gene3D - 224 443 IPR023213 -
Viun6g01591 448 Pfam Transferase family 19 442 - -
Viun6g01591 448 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 22 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g01591 Viun-Chr6 23841673 23845983 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g01591 12 443 Monolignol Biosynthesis Gene Families AT5G48930 30.872 2.92e-51 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g01591 K19861 - gmx:100793362 655.21