Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g01590 ATGGCCTCATCATTATTATTAACTTCTTCTTCTCCTTCTCTAAACTTTACGGTGCGAAGGTGCGAACCCCAGCTGGTCCCTCCAGCTATCCCCACTCCTCATGAAATTAAGCTACTTTCCGACATTGATGATCAAGAAGGCCTTCGTTTTCACGTTCCATTCATACAAATTTATCCAAAGCAAACATCAATGGCAGCAAAAGACCCAGTTCAAGTGATTCGACAAGCACTGTCACAAACACTTGTCTTCTATTACCCATTTGCGGGTAGGCTTAGGGAGGGTCCTCGCCGTAAATTGATGGTGGATTGCACCGGAGAAGGTGTCATGTTCATCGAGGCTGATGCTGACGTCACACTCGATCAGTTCGGTGATTCTCTCCACCCTCCATTCCCATGCTTCCATGAACTTCTATACCATGTTCCTGGTTCACAACAAATTACCGACACTCCCATTCTACTCGTACAGGTGACACGCCTTAGGTGCGGTGGTTTCATCTTGGCCTTCACCTTCAACCACACCATGTGCGATGGAGCTGGTCTTTCACAATTCATGAGCACATGGGCTGAAATGGCTCGTGGTGCAACCAAACTTTCCATTCCACCGGTTTGGCGTAGGGAGCTTCTAATGGCAAGAGACCCACCTCGCATCACATGCAACCATCGCGAATTCGAGCATGTCCCAGACACAGTCAAAGGAACCCTCGCATCAGACGAAGATGACATGGTTCTTCGATCGTTCTTCTTTGGACCTTCCCAAATAGCTGCTATTCGTGGCTTGATTCCCCCCAACATTCAGCACTGCACCACGTTTGATCTCATCACCGCATGCATCTGGCGTTGTCGTACAAAAGCATTGCAGATAGAGGCAGAAGAGGAAGTTCGCGTTATGGTGGTAGTGAATGCACGTGCAAAGTTCAATCCTCCTTTACCAGTTGGCTACTACGGCAATGCTATTGCATACCCTGCAGCAGTTAGCACTGCAGGGAAGCTTTGTGAGAATCCGTTTGGGTATGCAGTGAATTTGATAAATAAAGTGAAGGGTGAGGTGACAGAAGAGTACATGCATTCTGTGGCGGATCTCATGGTGAATAAGGGGCAATACATACCTGTAACTGAAAGGTCTTTCATGGTGTCAGATTTGAGATATTTTGGATCGAGAGAAACTGATTTTGGTTGGGGTGATGCTGCGTATGGTGGAGTAGCCAAAGGAGGACTTGGGCCATTTCCTGCAGTAACATTTGTGGTTCCTTTTAAGAATGCAAAAGGTGAAGAAGGTGTAGTATTACCCATTTGGTTGCCCCCGGAAGCTATGAACAGGTTTACCAAAGAGTTGGGTACGTGCGTGCTTTGA 1350 0.4719 MASSLLLTSSSPSLNFTVRRCEPQLVPPAIPTPHEIKLLSDIDDQEGLRFHVPFIQIYPKQTSMAAKDPVQVIRQALSQTLVFYYPFAGRLREGPRRKLMVDCTGEGVMFIEADADVTLDQFGDSLHPPFPCFHELLYHVPGSQQITDTPILLVQVTRLRCGGFILAFTFNHTMCDGAGLSQFMSTWAEMARGATKLSIPPVWRRELLMARDPPRITCNHREFEHVPDTVKGTLASDEDDMVLRSFFFGPSQIAAIRGLIPPNIQHCTTFDLITACIWRCRTKALQIEAEEEVRVMVVVNARAKFNPPLPVGYYGNAIAYPAAVSTAGKLCENPFGYAVNLINKVKGEVTEEYMHSVADLMVNKGQYIPVTERSFMVSDLRYFGSRETDFGWGDAAYGGVAKGGLGPFPAVTFVVPFKNAKGEEGVVLPIWLPPEAMNRFTKELGTCVL 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g01590 449 Gene3D - 227 444 IPR023213 -
Viun6g01590 449 Gene3D - 15 225 IPR023213 -
Viun6g01590 449 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 25 441 - -
Viun6g01590 449 Pfam Transferase family 21 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g01590 Viun-Chr6 23831514 23845983 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g01590 49 444 Monolignol Biosynthesis Gene Families AT5G48930 30.807 1.10e-53 184