Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g01574 ATGGGTACTGAATTAAGTTACGCACTTTCAAAAATGCAAATGCTATCCACTTCAGATTATGCCTCCGTTGTGTCCATGAACATTTTTGTGGCTCTGCTGTGTGCTTGCATTGTCATTGGCCATCTTCTTGAGGAGAATCGGTGGGTGAATGAATCTATCACTGCCCTGTTTATAGGTGTTTGTACTGGTGTAGTTATTTTGTTGCAAAGTCGCGGCAAAAGCTCGCATCTTCTAGTTTTTAGTGAAGATCTTTTCTTTATATACCTTCTGCCTCCTATCATATTTAATGCAGGGTTTCAAGTGAAAAAGAAACAGTTCTTTGTTAACTTCATGACCATCATGCTTTTTGGAGCTGTTGGTACATTAATAAATTGTAGCATCATAACTTTTGGTGTCATACAAATATTTAAGAGAATGGGTGTTGGAAAATCACTGGAGATAGGAGATTATCTCGCAATTGGGGCAATATTTGCTGCAACAGATTCAGTGTGCACATTGCAGGTGCTAAGCCAGGATGAGACACCTTTACTATATAGCCTTGTATTTGGCGAGGGTGTTGTGAATGATGCTACATCTGTCGTGCTTTTCAATGCAATCAAAAGTTTTGATCTCAACATAATTGACCACAGAATTGGTTTGCATTTTTTCGGCAATTTCTTCTACCTGTTTATCGCAAGCACCATGCTTGGGGTCTTGGCCGGTCTACTCAGCGCTTACATTATTAAAACGCTTTATATTGGCAGGCACTCTACAGATCGCGAGGTTGCTCTTATGATGTTAATGGCATACCTTTCCTACATTCTGGCTGAATTATGGTATCTGAGTGGCATTCTCACTGTATTCTTCTGTGGGATTGTTATGTCACATTATACTTGGCATAATGTGACTGAGAGCTCGAGAATCACTACCAAACATGCTTTTGCAACTCTCTCTTTTGTTCTTGAAACCTTTATCTTCCTTTATGTTGGTATGGATGCGTTGGACATTGAAAAGTGGAGGTTTGTTAGCGATAGGCCGAAAACATCTGTTGCTGTTAGTTCAGTATTATTGGGTCTCGTACTTGCCGGAAGAGCAGCATTTGTTTTTCCCTTATCCTTCTTATCAAACCTCACTAAAAAGAATCAAAGTGAAAAAATAAGTTTGAGGGAGCAGGTGATCATTTGGTGGGCTGGTCTTATGAGAGGTGCTGTTTCAATGGCACTTGCCTATAATCAGTTCACCTTGTCAGGTCACACTGAACTGCGCACCAATGCCATCATGATCACCAGCACCATCACTGTTGTGCTTGTCAGCACAGTGGTGTTTGGTTTGATGACCAAGCCACTCATAAGGTTTTTGCTGCCAGTTAGTCCACCTCCTAAACGCAAGAACAGCTTGGGAAATATGGAATCATCTAATCCTCCGAAATCAATCACTGTGCCCTTTCTTGGAGGCGCTCATGATTCTGAAAACGATCTTGATGGCAGTGAAGATCACCGTCCAAACACTATTCGTGCCTTATTCAGCAATTCAACACATAATGTACATCGCTTATGGCGTACGTTTGATAATTCAGTCATGCGTCCAGTTTTCGGCGGTAGGGGATTTGTTCCAGTGGCTACTACCTCACCAACTGGCAGAAGTAATAGTCAGTGGCACTAA 1641 0.415 MGTELSYALSKMQMLSTSDYASVVSMNIFVALLCACIVIGHLLEENRWVNESITALFIGVCTGVVILLQSRGKSSHLLVFSEDLFFIYLLPPIIFNAGFQVKKKQFFVNFMTIMLFGAVGTLINCSIITFGVIQIFKRMGVGKSLEIGDYLAIGAIFAATDSVCTLQVLSQDETPLLYSLVFGEGVVNDATSVVLFNAIKSFDLNIIDHRIGLHFFGNFFYLFIASTMLGVLAGLLSAYIIKTLYIGRHSTDREVALMMLMAYLSYILAELWYLSGILTVFFCGIVMSHYTWHNVTESSRITTKHAFATLSFVLETFIFLYVGMDALDIEKWRFVSDRPKTSVAVSSVLLGLVLAGRAAFVFPLSFLSNLTKKNQSEKISLREQVIIWWAGLMRGAVSMALAYNQFTLSGHTELRTNAIMITSTITVVLVSTVVFGLMTKPLIRFLLPVSPPPKRKNSLGNMESSNPPKSITVPFLGGAHDSENDLDGSEDHRPNTIRALFSNSTHNVHRLWRTFDNSVMRPVFGGRGFVPVATTSPTGRSNSQWH 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g01574 546 NCBIfam sodium/hydrogen exchanger 3 28 446 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Viun6g01574 546 Gene3D - 146 198 - -
Viun6g01574 546 MobiDBLite consensus disorder prediction 457 471 - -
Viun6g01574 546 PRINTS Na+/H+ exchanger signature 84 95 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Viun6g01574 546 PRINTS Na+/H+ exchanger signature 154 164 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Viun6g01574 546 PRINTS Na+/H+ exchanger signature 98 112 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Viun6g01574 546 PRINTS Na+/H+ exchanger signature 113 121 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Viun6g01574 546 MobiDBLite consensus disorder prediction 456 477 - -
Viun6g01574 546 PANTHER SODIUM/HYDROGEN EXCHANGER 11 524 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Viun6g01574 546 Pfam Sodium/hydrogen exchanger family 28 443 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g01574 Viun-Chr6 23686860 23691513 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g01574 10 542 Antiporters AT3G05030 74.019 0.0 802
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g01574 - - gmx:100789667 925.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun6g01574 6 23686860 23691513 Viun6g01574 6 23686860 23691513 ECH
Viun6g01574 6 23686860 23691513 Viun7g02160 7 26171017 26177266 PCT