Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g01561 ATGGAGTGCAACAAGGATGAAGCTGTGAGGGCTAAGCAGATTGCTGAAAATAAGATGCAAGCTGGTGACTATGAGGGGGGGCTGAAATTTGCTACGAAAGCCCAAAGGCTGTTTCCTGATATTCAAAACATCGTTCAGATCCTTGCAGTTTGTGAGGTCCACTGTGCTGCTCACAAGAAACACTCTGGGTCTGACATGGACTGGTATGGAATTCTCCAGACTCAACAATCTGCCGATGAAGCAACCATTAAGAAACAGTATAGAAAGCTTGCACTGCTACTTCACCCTGATAAAAATAAATCTGCTGGTGCAGAGGCTGCTTTCAAGTTGGTTGGTGAAGCTAACAGAGTGTTAAGCGATCCATCGAAGCGTACTCTGTATGACTCAAAATTTGGAGTTTCAGTGGGAAATACAGCAGCTAAGGTCGCCCCTTGTCACCCAAATGGAAATGCAAGGAATTATCAGAACATTTTTAATTCACAGCCCCATGCTTGGAATTCAAATCAGTATGAAAGTCAGACATTCTGGACATGTTGTTCTCATTGTAATACTAGATATCAATACTACAAAACTATTTTAAATCAGACCATACGCTGTCAACAATGTTCTAAATCCTTTAAAGCTCTTGATATTGGGAACCCCTATGTGCCACCAACATATTGGTCACCTTTCAATAATAATCAAGGGTCTGCAAAACATGCAAATGGCAAAAATGGCCATGTGGCTGCAGGAGCGACAAAGGCTGATGTTAAAGTGTCCAAAGCTAAGGAATCACAAGCGTCAACAAAGGTTGGTTGTAAAAGAGGAAGGCAGTCAGCATCAGATGATAATAACAAAGCTGGAGATGGTAAACGCATGAAAGACACCAAGGATCAAGAAAATACGGTTGATCCTCCTAGGAGAACTTCAAGGAAAAAGCAGCATGTTCTGTACCCAGAAACTGATAAAGCTGGTGATTTTGGAATTTCATCCAAAACTGATAAAGTGTTAGCAACTGGTGATGGTGATCAGAATGGGGAGACAAGAAATAAAGCAGATGCACTACGTGAAGAAACAATTTTAAGGAATAAAGTCAAAGTTGAGCAGACTAATGTGCAAGGAGAGGAGGTATTGAACTCAGATCTCAATGATAGAAAGTCTAAAGCTGTCTATTGTTCTCCACCGAAGTCAAATTTACCTCCCAATTCAGAGATTTTCTGTCCTGATCCAGATTTCAGTGATTTTGAGAGAGATAAGGCAGAGGATTGTTTTGCTGTTAATCAATTATGGGCTGTTTTTGACAATAATGATGGTATGCCACGATTCTATGCTCTTGTGAAGAAAGTCCACTCCCCTTTCAAGTTGCGGATTACTTGGCTAGAAGCTAACTCAGATGACCAAGGTGAGATTGACTGGAATAAAGCCGGTTTGCCTATTGCTTGTGGTAAGTTCAGACTTGGTCAATCTCAGAGAACTTCAGATCGTTTTATGTTCTCTCATCAGATGCATTGCATAAAAGGAAGTAATACTACATATCTGATATACCCAAAGAAGGGAGAAACTTGGGCAATTTTCAGACATTGGGATCTTGGGTGGAGTTCAAATCCAGAAAAGCATATTGAGTATGAATTTCAATATGTGGAAGTTCTATCAGATTTTGATGAAAATGTTGGCATTGAAGTTGCTTATCTTGGCAAACTGACAGGGTTTGTTAGTCTCTTTCAACATACTGCATTCGGTGGTATTAGCTTATTTTGTATATCACCTAGTGAGATGTACAGGTTCTCTCATCGGATTCCTTCAAACAAGATGACAGGTGCTGAAAGGAAAGGTGTTCCAAGTGGATCTTTTGAACTTGATCCTGCTGGTCTTCCTACTTGTCTTTTTGAAGTTGGTGATACCGGGGTTCCGAAAATGGATGGAGTCAATTGTTCCCACCAGGAATACTCTAAAGTTGAACAGGCAACTTCTAGTGATTGTATTGACAAATCAAAGTTGCAAGAGAGTAATGATAGTATTCAGAAATCAAAGTTGCAAGAGAGTATTGATGCCGAAAGAACAGCACAAATTCTCAGAAGGTCTCCAAGGTCGAGCCAAAAAAATATGGACAATGGCCAACCAAGCACTAGTCAATTCACGGTCAGAAAGGATGACATAAACATTGACCACAGGGGCTACAGTCCACCAGAGGGAAACGCTGCTTCATCCCACACTAATGAGAGGAAGGTCAAGAAACCTCAGAAACATGAGAAAAATAGTTATGATGGAGAGATATTGAAAGTTGGAAAGTTGCATAAAGATCTAAGCAAGAAAAATGCTCTAGGAGATGCATCTGAAAGGACATGTAAATTGACTGTTAATCATTCAAAAAACAGCAAAAATGTAAAGAGTAGCAACATTCCTCAGTTTGGAGAATCATGTTACGACTTTAAGATGGAAAAATCTGAAAAAACGTTTCAGTGTGGTCAGATATGGGCAATATATGGTGATAGGGATCATATGCCCAATACTTACACTCAAATTAAGAAGATTGAATTCACACCTAGTTTTAGATTGCAGGTTTCCATGCTTGAACCGTGCTCACCGCCAGGTGACCTTAGAAGAACAATATCTTGTGGCAACTTCGAAGTTAAAAAGGGCAAATTACAGATTCTCTCTCTCTCTGCATTCTCTCACCAGTTAAAAGTTGAACCTTTGGTAAATAATAGATATGAAATTTACCCTAGAAAAGGTGAGGTTTGGGCTCTGTACGAGGACCAGAACTATGAACTGACTTCTTCAAAGCAGGGCAGAGGTAAATGTGATATAGTAGAAGTATTAGCAGATAGTGACAAGAGTATACAGGTTGTTGTTCTGACGCCACATAGCAACTCCAAGACAATTTTCAAAGCTCCTAGAATTCAGAGATCTAAAACTGGTGTAATTGAAATATTAAGAGAAGAGGTTGGTAGATTTTCACATCAGATTCCTGCTTTTCAGCACAGGGACAATGTGCATCTCAGAGGGTGTTGGGAGCTTGATCCTTCTTCAGTTCCTGGTTCTTTCGTACCAATAAACTGA 3039 0.4001 MECNKDEAVRAKQIAENKMQAGDYEGGLKFATKAQRLFPDIQNIVQILAVCEVHCAAHKKHSGSDMDWYGILQTQQSADEATIKKQYRKLALLLHPDKNKSAGAEAAFKLVGEANRVLSDPSKRTLYDSKFGVSVGNTAAKVAPCHPNGNARNYQNIFNSQPHAWNSNQYESQTFWTCCSHCNTRYQYYKTILNQTIRCQQCSKSFKALDIGNPYVPPTYWSPFNNNQGSAKHANGKNGHVAAGATKADVKVSKAKESQASTKVGCKRGRQSASDDNNKAGDGKRMKDTKDQENTVDPPRRTSRKKQHVLYPETDKAGDFGISSKTDKVLATGDGDQNGETRNKADALREETILRNKVKVEQTNVQGEEVLNSDLNDRKSKAVYCSPPKSNLPPNSEIFCPDPDFSDFERDKAEDCFAVNQLWAVFDNNDGMPRFYALVKKVHSPFKLRITWLEANSDDQGEIDWNKAGLPIACGKFRLGQSQRTSDRFMFSHQMHCIKGSNTTYLIYPKKGETWAIFRHWDLGWSSNPEKHIEYEFQYVEVLSDFDENVGIEVAYLGKLTGFVSLFQHTAFGGISLFCISPSEMYRFSHRIPSNKMTGAERKGVPSGSFELDPAGLPTCLFEVGDTGVPKMDGVNCSHQEYSKVEQATSSDCIDKSKLQESNDSIQKSKLQESIDAERTAQILRRSPRSSQKNMDNGQPSTSQFTVRKDDINIDHRGYSPPEGNAASSHTNERKVKKPQKHEKNSYDGEILKVGKLHKDLSKKNALGDASERTCKLTVNHSKNSKNVKSSNIPQFGESCYDFKMEKSEKTFQCGQIWAIYGDRDHMPNTYTQIKKIEFTPSFRLQVSMLEPCSPPGDLRRTISCGNFEVKKGKLQILSLSAFSHQLKVEPLVNNRYEIYPRKGEVWALYEDQNYELTSSKQGRGKCDIVEVLADSDKSIQVVVLTPHSNSKTIFKAPRIQRSKTGVIEILREEVGRFSHQIPAFQHRDNVHLRGCWELDPSSVPGSFVPIN 1012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g01561 1012 Pfam DnaJ domain 67 128 IPR001623 -
Viun6g01561 1012 MobiDBLite consensus disorder prediction 659 746 - -
Viun6g01561 1012 Gene3D DnaJ domain 53 142 IPR036869 -
Viun6g01561 1012 SUPERFAMILY Chaperone J-domain 63 130 IPR036869 -
Viun6g01561 1012 PRINTS DnaJ domain signature 69 87 IPR001623 -
Viun6g01561 1012 PRINTS DnaJ domain signature 103 123 IPR001623 -
Viun6g01561 1012 PRINTS DnaJ domain signature 87 102 IPR001623 -
Viun6g01561 1012 SMART dnaj_3 66 123 IPR001623 -
Viun6g01561 1012 MobiDBLite consensus disorder prediction 730 746 - -
Viun6g01561 1012 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN-RELATED 1 1005 - -
Viun6g01561 1012 CDD DnaJ 67 120 IPR001623 -
Viun6g01561 1012 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Viun6g01561 1012 MobiDBLite consensus disorder prediction 684 708 - -
Viun6g01561 1012 MobiDBLite consensus disorder prediction 269 306 - -
Viun6g01561 1012 Pfam Domain of unknown function (DUF3444) 799 987 IPR024593 -
Viun6g01561 1012 Pfam Domain of unknown function (DUF3444) 397 601 IPR024593 -
Viun6g01561 1012 MobiDBLite consensus disorder prediction 246 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g01561 Viun-Chr6 23618992 23627025 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g01561 4 218 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 35.000 3.71e-29 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g01561 - - var:108342824 1791.16