Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g01523 ATGGCGCTGCCATGGTTGAAATTGAAAGCAAAACGAAAACCCTCTTCACTCTCAGTAATCCTCACTACCACTCTCCTTCTTCTGGTCTTGTTGTTCTTCGCGATAAACCCTCCTTCTCCTTCTCCCATTGCCACACCACGCAGGTCACTCCTCCTTGCTCCCTCACCGTGTTCCGGCAAATCCGATGGAATCCTCAACTACCAGTGCCTCTTCCCACAACACACCGCTCTCTCCATCCCCTTCCTCTCCCTCTTCCTCCTCCTCCACTTCTACATCCTCATCACCACCGCCCAGGACCACTTCTCCCTCGTCACCACCAAACTCGCCTCCCACCTCGCCCTCTCCCCCAGCATGGCCGCCGTCACGCTTCTCTCCCTCGGCAACGGCGCCCCCGACGTCTTCTCCTCACTCGCAGCCCTCCGCGCCGGCCAGTACCGCACTGGCTTCGGCGCTATACTCTCCGCCGGCACCTTCGTCTCTGCCCTCGTCGTCGGCTTCGTCGCCATCTACGCCGCGCCCTTCTCCGTCGATCCCGCGCCCTTCGTTAGGGATGTTCTCTTCTACCTCACCGCTGCAATGTTCCTCTTCTACGTCTACCTCAGCGCCGAGATTTTCCTTTGGCAGGCCGTTGGATTCGTTGCCTTCTACTTGTTCTTCGTAGGGTTTGTCTTCTACATGGACTTGGGGATGGCAGATCGCACTCAAAAGAGTTCCGCGGATCTCGAGGGACAGTTGGAATCGGATCCCGACCCTGTAGTTTCGAGATCAGCCGAGGGAGAGAAACGCGCTTCCGGAGTGCGTGGAGTGTTTCGATTGATTTCAAAAACATGGGAGCTTCCTGTGGAAACTCTCCTGAGATTGACGATCCCTCAACCAGCACCAGCACAATGGAGCAGATTTTATGCATCAGCCAATATTGCACTTTGTCCACTGGCCCTCTTGTATGCCTGCAACTCATTCATGCCATTTAACCACCCCATAGTTTTCCTCCTCCCCAACACTCACTTTCCCCTCTGCCGGAGAGCTGGTGAATTGCCTGGAAGCTATAGGCACACATCTGAAACTGCCGCCTGCACTCCTGGGTCTTACTGTGCTGGCATGGGGAAATTCAGTAGGTGA 1119 0.5567 MALPWLKLKAKRKPSSLSVILTTTLLLLVLLFFAINPPSPSPIATPRRSLLLAPSPCSGKSDGILNYQCLFPQHTALSIPFLSLFLLLHFYILITTAQDHFSLVTTKLASHLALSPSMAAVTLLSLGNGAPDVFSSLAALRAGQYRTGFGAILSAGTFVSALVVGFVAIYAAPFSVDPAPFVRDVLFYLTAAMFLFYVYLSAEIFLWQAVGFVAFYLFFVGFVFYMDLGMADRTQKSSADLEGQLESDPDPVVSRSAEGEKRASGVRGVFRLISKTWELPVETLLRLTIPQPAPAQWSRFYASANIALCPLALLYACNSFMPFNHPIVFLLPNTHFPLCRRAGELPGSYRHTSETAACTPGSYCAGMGKFSR 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g01523 372 Pfam Sodium/calcium exchanger protein 83 224 IPR004837 GO:0016020|GO:0055085
Viun6g01523 372 Gene3D - 114 242 IPR044880 -
Viun6g01523 372 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 269 326 - -
Viun6g01523 372 MobiDBLite consensus disorder prediction 239 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g01523 Viun-Chr6 23326429 23328811 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g01523 41 338 Antiporters AT1G08960 62.179 4.09e-119 354
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g01523 K13754 - gmx:100775437 496.123