Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g01484 ATGAGGTTCGTGTTCATCATTACCTTGTTGGTGTTCTTATCATTGCAAAGAGCCAACATTTTGGCTGTGGATGCGGCGTGGAATGCAGTAGGAAATGAAAATGGAATCAAGAAAACCTCAGGGAATGATGAGAATGAAAACAAGGAATCTCCTAGACTTGAAAACTTCAGAACTTTGCTTGGACTCAAGTCACTCAACATGTTTCACACAAGAAGGTTATGCTACAGCGTTTTTAAATCAAACTGTGTGTCCCTCTCAGCTTCTCTGTCATCCAAAACCCAAGCTGAGCCTCCGAATTCGGAGCTGCACGTGCATCCTGGTTCTTATCACTCACATAGAAGCATGCCACTTCACGAGATTCAACAACAAGATAGAGGTAGCGCAAATAGAACAACACTAGTGGCTGTTGTAGTATCTGGTGTAGTTGCTACCTTAATTTGTGCACTCGGGTGTGTCTGTGTTTGCAAGAGATTTAGAAATCAGAAATGGAAACCCAATAGGACAATGCCACTGTTTAGAAAAAACGGAAGAACAGCAGGTACGTGCCATAATTCATCAAGCAATGTGAGTTTAAACTCTGACCCTGATTTGCTTTCCTTGAAACAAACTTGTGAGACAAAAAGTGGCACTTCAAGCCGTAGTTCCCTAAAACGTGCAATTAATGAGGAGAAGGTGTTGAATCAAGAAGAACATGACAATGCCAGCACTGCCAGTTATTCCGCCACCAAGGAAACTCTATCTGTTCACGAGGATTTGGAATATGATGGTGGTGGCAAAGCTTCCTCTGCAGAAAAAACTGACCCTGAAGCATGTCATTCATCATCAGATTATGAAAGTTTTCATTCATGTGTTGAAACAGAACCACTGTTTCTGTCCCCTAGAAATTTAATCTCTGAGACAACTCAATTTCCTTGTTCTTCCAACAATTCAACTCCAAAGGTAGAATCTAACCAATCACCATCCACTCCCAAAGATGAAGAGCAAAAGAGAAGTGAAACTTCTCAATCAAGTATTCCTCCCCCACCAAGTCCACCTCCGTTTTTGAAACGAAACATGAACAACAGTGTGATCAAAACCCCACCTTCTCAACAACTGCCAAAACTCAAACCACTTCACTGGGACAAAGTAAGAGCCACACCAGATCGAACGATGGTGTGGGATACGCTTCGAACAAATTCGTTTGAGTTGGATGAGGAAATGATCGAGTCACTCTTTGGCTACAATTTACAGAATTCAACAAAGAACAACCCAACAATGAGTAAAACCCCGTCCCCTAAGGAGCATGTACTTGAGCCAAAACGCCTGCAAAATATAGCAATACTCTCTAAAGCTCTAAATATCACAGCAGAAGAAGCATGTGAGGCTCTAATACTAGGGAAGGGTCTGTCTCTGCAACAACTGGAGGCACTGGTAAAAATGGTACCAACGAAAGAAGAAGAGGATAAGCTATTGAGCTACAAAGGAGGTGTCAATGAACTTGGGTTCGCTGAAAATTTTGTGAGAGTAATGCTTAGCATACCATTTGCTTTTCAACGAGTGGAAGCCATGCTTTACAGAGAAACTTTCGAAGACGAAGTGACTCACCTCAGTGACTCTTTCACAATGCTAGAGGAAGCATGCAAGGAACTAAGGTCAAGCAAGTTCTTCTTGAAACTGCTGGAAGCAGTGCTGAAAACAGGAAACCGCATGAACGTGGGAACAACAAGGGGAGGTGCTAGAGCTTTCAAACTTGATGCCCTTCTCAAGCTTGCTGATGTTAAAGGAACAGATGGTAAAACCACCTTGCTCCATTTCTTTGTTCAGGAGATAGTTCGCTCAGAAGGAACCAAAGCTTCAAAGAGCATCGTGGAACAGAAGAGTGAAAACAGATCAGAGGAAGAGGAGGAAGAAGATTATAGAAGAATGGGACTAAAACTTGTCTCTGGACTTAGTGCTGAGTTATGCAACGTTAAAAAGACTGCCACAATTGACTTAAACGTGCTTGCAAGTTCTGTCTCGAACCTATCAAGTGGGTTGGGTAACATGCAGAAGCTGGTAAAAGGGTTGTTGTGTGAAGATGAAAGAAACAAGAGCTTTGTGATTTCCATGAAGCGGTTTCTGAATTATGCAGAAAGAAAGGTAGAAGAGTTGCATGGAGATGAAGCTAGAGTGATGGGTCGGGTAAAAGAAGTAACTGAGTATTTTCATGGGGATGTGAGTGACGAAGAGTCGAATCCACTTCAAATATTTGTAATAGTAAGGGACTTTCTTGATATGGTAAATAATGTGTGCAATGAGCTTAAAAGGTCTATGAAATCCCCTCGCACTATTTGGATTGAGTAG 2322 0.4199 MRFVFIITLLVFLSLQRANILAVDAAWNAVGNENGIKKTSGNDENENKESPRLENFRTLLGLKSLNMFHTRRLCYSVFKSNCVSLSASLSSKTQAEPPNSELHVHPGSYHSHRSMPLHEIQQQDRGSANRTTLVAVVVSGVVATLICALGCVCVCKRFRNQKWKPNRTMPLFRKNGRTAGTCHNSSSNVSLNSDPDLLSLKQTCETKSGTSSRSSLKRAINEEKVLNQEEHDNASTASYSATKETLSVHEDLEYDGGGKASSAEKTDPEACHSSSDYESFHSCVETEPLFLSPRNLISETTQFPCSSNNSTPKVESNQSPSTPKDEEQKRSETSQSSIPPPPSPPPFLKRNMNNSVIKTPPSQQLPKLKPLHWDKVRATPDRTMVWDTLRTNSFELDEEMIESLFGYNLQNSTKNNPTMSKTPSPKEHVLEPKRLQNIAILSKALNITAEEACEALILGKGLSLQQLEALVKMVPTKEEEDKLLSYKGGVNELGFAENFVRVMLSIPFAFQRVEAMLYRETFEDEVTHLSDSFTMLEEACKELRSSKFFLKLLEAVLKTGNRMNVGTTRGGARAFKLDALLKLADVKGTDGKTTLLHFFVQEIVRSEGTKASKSIVEQKSENRSEEEEEEDYRRMGLKLVSGLSAELCNVKKTATIDLNVLASSVSNLSSGLGNMQKLVKGLLCEDERNKSFVISMKRFLNYAERKVEELHGDEARVMGRVKEVTEYFHGDVSDEESNPLQIFVIVRDFLDMVNNVCNELKRSMKSPRTIWIE 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g01484 773 PANTHER FORMIN-RELATED 14 767 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Viun6g01484 773 ProSiteProfiles Formin homology-2 (FH2) domain profile. 358 773 IPR015425 -
Viun6g01484 773 SUPERFAMILY Formin homology 2 domain (FH2 domain) 339 765 - -
Viun6g01484 773 MobiDBLite consensus disorder prediction 301 372 - -
Viun6g01484 773 MobiDBLite consensus disorder prediction 226 275 - -
Viun6g01484 773 SMART it6_source 357 768 IPR015425 -
Viun6g01484 773 Pfam Formin Homology 2 Domain 362 753 IPR015425 -
Viun6g01484 773 MobiDBLite consensus disorder prediction 169 189 - -
Viun6g01484 773 MobiDBLite consensus disorder prediction 231 245 - -
Viun6g01484 773 MobiDBLite consensus disorder prediction 301 319 - -
Viun6g01484 773 Gene3D Formin, FH2 domain 352 765 IPR042201 -
Viun6g01484 773 MobiDBLite consensus disorder prediction 246 274 - -
Viun6g01484 773 Coils Coil 615 635 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g01484 Viun-Chr6 23084202 23087415 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g01484 343 761 FH2 protein (formin) Gene Family AT3G05470 68.160 0.0 578
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g01484 - - gmx:100805407 1030.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun6g01484 6 23084202 23087415 Viun6g01484 6 23084202 23087415 ECH