Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g01465 ATGATGATGACAACAATGGAGGGGATGATGGACAAGGCCGTCTTGGATGACGTCATTCGGAGGCTTCTCGAAGGGAAAGGAGGCAAACAGGTTCAGCTCTCTGAGTCCGAGATCCGTCAACTCTGCGTCAATGCCCGACAAATCTTCCTCTCTCAGCCAATTCTTCTCGAGCTCCGTGCCCCCATCCGCATCGGCGGTGATATACATGGTCAGTACCAGGACTTACTGAGGCTTTTTGAATATGGTGGCTACCCTCCTGCGGCAAACTACTTGTTTCTGGGGGATTATGTGGACAGAGGGAAGCAAAGTTTGGAGACAATTTGTTTGCTTTTGGCCTACAAAATAAGATATCCAGACAAAATTCATCTCTTGAGGGGAAACCATGAAGAAGCGAAGATTAACCGTATATATGGTTTTTATGATGAATGTAAAAGGAGGTTCAATGTAAGGCTATGGAAGATATTCACCGATTGCTTTAACTGTTTGCCGGTGGCTGCTCTCATTGATGAGAAAATACTTTGTATGCATGGTGGACTCTCTCCAGAATTAGAAAATTTAGATCTGATAAGAGAGATTCAAAGGCCTACTGAAATTCCAGATAGTGGTCTCCTTTGTGATCTGCTTTGGTCTGATCCTGATGCTAGCATTGAGGGTTGGGCCGAGAGTGACCGAGGCGTTTCATGTACCTTTGGACCTGATGTACTTATGGAGTTCTTGGATAAAAATGACCTTGATCTTGTTTGCAGGGGGCATCAGGTTGTGGAGGATGGATATGAGTTTTTTGCTAAAAGAAGATTAGTGACGATATTTTCTGCTCCGAATTATGGTGGAGAATTTGACAATGCTGGTGCGTTGTTAAGCGTTGATGATTCTCTTGTATGTTCCTTTGAGATATTGAAACCCGCTGATAGAGCATCAGGAAGTAGTTCTTCGAAAATGAATTTTAAGAAGCAGCCACCCAAACTGGGAAAGATCTAG 978 0.4387 MMMTTMEGMMDKAVLDDVIRRLLEGKGGKQVQLSESEIRQLCVNARQIFLSQPILLELRAPIRIGGDIHGQYQDLLRLFEYGGYPPAANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEEAKINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDEKILCMHGGLSPELENLDLIREIQRPTEIPDSGLLCDLLWSDPDASIEGWAESDRGVSCTFGPDVLMEFLDKNDLDLVCRGHQVVEDGYEFFAKRRLVTIFSAPNYGGEFDNAGALLSVDDSLVCSFEILKPADRASGSSSSKMNFKKQPPKLGKI 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g01465 325 Pfam Serine-threonine protein phosphatase N-terminal domain 15 59 IPR031675 -
Viun6g01465 325 Pfam Calcineurin-like phosphoesterase 66 253 IPR004843 GO:0016787
Viun6g01465 325 CDD MPP_PP1_PPKL 14 301 - -
Viun6g01465 325 ProSitePatterns Serine/threonine specific protein phosphatases signature. 124 129 IPR006186 GO:0016787
Viun6g01465 325 PRINTS Serine/threonine phosphatase family signature 123 147 IPR006186 GO:0016787
Viun6g01465 325 PRINTS Serine/threonine phosphatase family signature 61 88 IPR006186 GO:0016787
Viun6g01465 325 PRINTS Serine/threonine phosphatase family signature 90 117 IPR006186 GO:0016787
Viun6g01465 325 PRINTS Serine/threonine phosphatase family signature 157 183 IPR006186 GO:0016787
Viun6g01465 325 PRINTS Serine/threonine phosphatase family signature 265 281 IPR006186 GO:0016787
Viun6g01465 325 PRINTS Serine/threonine phosphatase family signature 243 263 IPR006186 GO:0016787
Viun6g01465 325 PRINTS Serine/threonine phosphatase family signature 186 213 IPR006186 GO:0016787
Viun6g01465 325 Gene3D - 7 310 IPR029052 -
Viun6g01465 325 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 18 312 - -
Viun6g01465 325 MobiDBLite consensus disorder prediction 304 325 - -
Viun6g01465 325 FunFam Serine/threonine-protein phosphatase 6 311 - -
Viun6g01465 325 SMART pp2a_7 33 303 IPR006186 GO:0016787
Viun6g01465 325 SUPERFAMILY Metallo-dependent phosphatases 10 303 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g01465 Viun-Chr6 22964678 22967325 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g01465 62 247 Calmodulin-binding Proteins AT5G63870 33.032 3.35e-29 112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun6g01465 6 22964678 22967325 Viun6g01465 6 22964678 22967325 ECH