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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Viun6g01452
ATGGCCATGCTTGGTTTCCTTTTCATTGTCGTGCTTTTACCCTCCTTTAAGGCTCTCTCATATGAACCCATTCACTCAGAAATCCAAACCCAAGACATGCAAGCATTGATTGCACAAGCATGCATGGACATTGAAAACCAAAACTCCTGCCTCACAAACATCCACAACGAGCTCACTAAAATAGGCCCTCCAAGCCCCACTTCAGTGATGAGTGCAGCACTGAAGGCCACACTCAACGAAGCACTAGTGGCCATCGACAACATGACAAAGATCACCACCTTCTCCGTCAGCTACCGCGAGCAACAAGCCATAGAAGACTGCAAGGAGCTCTTGGATTTCTCAGTTTCTGAGCTCGCATGGTCCCTGGGAGAGATGAGGAGAATTCGCGGAGGAGACACCAACGTGCAACACGAGGGCAACCTCGAAGCGTGGCTCAGTGCTGCACTCAGCAACCAAGACACGTGCCTTGAAGGGTTCGAAGGAACAGACAGACGCCTCGAGAGTTACATCAGTGGAAGCTTGACACAAGTCACACAACTCATCAGCAATGTTCTGTCCCTGTACACGCAGTTGCATACCTTACCCTTTAAGCCTCCAAGAAACAAAACTATTGCAGAATCTGATGGAACCTCAGAGTTTCCTGAATGGATGAGTGAGGGTGATCAAGAGTTACTCAGAGCCAAGCCACATGGTGTGCGTGCGGACGCAGTTGTTGCTTTGGATGGGAGTGGTCACTATCGCTCCATCGCCGAAGCTGTTAATGCAGCTCCGAGTCACAGTGCAAGAAGGTATATTATTTACGTGAAAAAGGGACTTTACAAGGAGAATGTTGACATGAAGAAGAAGATGACCAACATCATGCTCGTCGGAGATGGTATAGGCCAAACCATTATCACCAGCAACCGGAATTTCATGCAGGGATGGACCACTTTTCGAACTGCCACGCTTGCTGTGTCTGGGAAGGGTTTCATTGCAAGGGACATGTCGTTCCGGAACACAGCAGGGCCGGTGAACCATCAAGCGGTGGCGCTGCGTGTGGATTCAGACCAATCAGCCTTCTACAGGTGCAGTGTGGAAGGGCACCAAGACACGCTCTACGCTCACTCTCTGCGACAGTTCTACCGTGAGTGCGAAATCTATGGCACCATAGACTTCATTTTCGGAAACGGTGCTGCAGTGCTGCAAAACTGCAAAATATACACCAGAGTCCCACTTCCCTTGCAGAAGGTTACAATCACGGCCCAGGGCAGAAAAAGCCCACACCAGTCCACGGGCTTCACCATCCAGGACAGCTATATTCTGGCCACCCAGCCCACCTACCTGGGCCGGCCCTGGAAACAATACTCTAGGACGGTTTACATTAACACTTACATGAGTGGGCTTGTCCAGCCCCGAGGCTGGCTTGAGTGGTTCGGAAACTTTGCCCTCAACACTTTGTGGTACGGTGAGTACAGAAATTATGGGCCTGGTGCATCCCTCTCGGGCCGGGTCAGATGGCCCGGTTATCATGTAATTAAAGATGCTTCCACCGCTAGTTTTTTCACTGTTCAGAGGTTCATTAATGGTGACACGTGGCTGCCTAGGACAGGTGTCAAGTTCACAGCAGGTCTCACCAATTGA
1620
0.5056
MAMLGFLFIVVLLPSFKALSYEPIHSEIQTQDMQALIAQACMDIENQNSCLTNIHNELTKIGPPSPTSVMSAALKATLNEALVAIDNMTKITTFSVSYREQQAIEDCKELLDFSVSELAWSLGEMRRIRGGDTNVQHEGNLEAWLSAALSNQDTCLEGFEGTDRRLESYISGSLTQVTQLISNVLSLYTQLHTLPFKPPRNKTIAESDGTSEFPEWMSEGDQELLRAKPHGVRADAVVALDGSGHYRSIAEAVNAAPSHSARRYIIYVKKGLYKENVDMKKKMTNIMLVGDGIGQTIITSNRNFMQGWTTFRTATLAVSGKGFIARDMSFRNTAGPVNHQAVALRVDSDQSAFYRCSVEGHQDTLYAHSLRQFYRECEIYGTIDFIFGNGAAVLQNCKIYTRVPLPLQKVTITAQGRKSPHQSTGFTIQDSYILATQPTYLGRPWKQYSRTVYINTYMSGLVQPRGWLEWFGNFALNTLWYGEYRNYGPGASLSGRVRWPGYHVIKDASTASFFTVQRFINGDTWLPRTGVKFTAGLTN
539
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Viun6g01452
539
Gene3D
Invertase/pectin methylesterase inhibitor family protein
33
192
IPR035513
-
Viun6g01452
539
PANTHER
PECTINESTERASE
11
527
-
-
Viun6g01452
539
Gene3D
-
230
537
IPR012334
-
Viun6g01452
539
CDD
PMEI-like_4
64
191
-
-
Viun6g01452
539
NCBIfam
pectinesterase inhibitor domain
6
192
IPR006501
GO:0004857
Viun6g01452
539
Pfam
Plant invertase/pectin methylesterase inhibitor
36
187
IPR006501
GO:0004857
Viun6g01452
539
SUPERFAMILY
Pectin lyase-like
232
536
IPR011050
-
Viun6g01452
539
SUPERFAMILY
Plant invertase/pectin methylesterase inhibitor
36
191
IPR035513
-
Viun6g01452
539
ProSitePatterns
Pectinesterase signature 2.
379
388
IPR033131
-
Viun6g01452
539
FunFam
Pectinesterase
229
537
-
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Viun6g01452
Viun-Chr6
22873544
22875857
Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Viun6g01452
8
539
Carbohydrate Esterase
AT3G05620
64.338
0.0
712
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Viun6g01452
K01051
-
gmx:100810565
1002.66
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