Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g01395 ATGATAAGATACTCAATATTTGAAATAGCTAGACTTATGATGCTGAAACCTAATCTACTGGTCTTAGCCCTGATATGCTGCTGCAATATTAATATTGTTTATGCATATGGTTCAGTTGCAAACCCACAAACACATTTGCTAAACCAGAGGTGCAGCAAATACAACGCATCCAACTTGCATAGCTTCTTTAGCAGTATCAATGGAACGTTTTCAAGGCTTAAAGATCAAGTTAATAATCATAGAAAACACTTCGTCACTGCAGAATTACAAGCCAGGGGAAAGATCCTCATACATACTATGTTTCAATGCAGAAACTATCTCTCCAGAATTGACTGTCTTGCTTGCTTCAACACTGCATCCACCCAAATCCGCAACTGTTCTTCTGCCAAAGGTGCTAGAGTCATATACGATGGCTGCTTTCTCAGGTACGAGAGAGGGAGGTTCTACAATGAGACCACTGAACCTGACAATGGTGTATCATGTGGGAACATGAGTTCGAATGCCACTAGTTTTAAATTAGTTGCAGAACAAGTGTTAATGGAGCTCCAAACCACAGCACCCAAAATCAAAGGGTTTTATGCAGCTACTAAGACAGAGGTGGCTGGTGGTAGTGCAATTTATGCCATTGCTCAGTGTGTTGAAACTGCCACAGAACATGACTGTCTGCAATGTATGACTGTTGGATACAACAACTTACGAAGTTGTCTTCCCAACACAGAGGGTAGAGCATATGATGCTGGTTGTTTTATGAGATACTCCACCACACCCTTCTTTGCTGATAACCAAACCATTCATATCACACCCTATTTAGATCAAGTTGGAAATCCACAGCCACATCTACTGAACAAGGGGTGCAGCCCATACAACTCATCCAACTTGCCTAGCTTCTTTGAGAATCTCAATAAAACGTTTTCAAGTCTGAAAGCACAAATTAGCAATGATCAGAACAAGCACTTTGCCACAGCAAATACCACCAGGGGAGAGGTGCTAACATATGCTATCTTTCAATGCAGAAACTATCTCTCCAAAACCGAATGTCTTGCTTGCTTCAACACTGCCTCCACCCAAATCCGCAACTGTTCTGCTGCCAACGGTGCCAGAATCATATACGATGCTTGCTTCCTCAGGTACGAGAGTGAGAGTTTCTACGACCAGACTACTGAACCTGGGAATGGTGCATCGTGTGGAAACACGAGCGCAATGGTTGTTGGTTTTAGCTTAGTTGCACAACAAGTGCTAATGCAACTCCAAACAGTAACACCCAAAACCAAAGGTTTTTATGCAGCTACAAAGACAAAGTTGGTTGATGGCAGTGCAATTTATGCTGTTGCACAATGTGTTGAAACTGCCGCAGAGAATGATTGTTTGAAATGCATGCAAGTTGGATACAACAACTTACAAAATTGTCTTTCCAACAACACATCGGGTACAGCATATGATGCTGGTTGTTTCATGAGATACTCCACCACACCCTTCTTTCCTGATAATCAAACCATTGATATCACGCCCTATTTAACACGAGGAGGTTCAAGAAAGAAGTGGATCATTATAGGTGGTGTTGTTGGAGGTGGAGGTCTACTTCTCATCATCCTTGCAGTGTTTGCCTTTCGAAGATCCAGAAAACCTAAGAGGTTTCCCAGAGGTGATATATTGGGAGCAACCGAGTTGAAAGGTCCAGTTAATTACAAATATGCCGACTTGAAAGGAGCAACACAGAATTTTAGCAACGAAAATAAACTTGGAGAAGGAGGATTCGGTGATGTGTACAAGGGTACTCTGAGAAATGGAAAAATTGTTGCAGTCAAGAAATTGGTGTTGGGAAAATCAAGCAAGATGGAGGATGATTTTGAGAGTGAAGTGAAGCTAATAAGTAATGCTCATCACAGAAATCTGGTTAGACTTCTTGGTTGCTGCATTAAAGGAGAAGAAAGAATCCTGGTTTATGAGTACATGGCCAACAGTAGTCTTGACAGATTTTTATTTGGTGACAGAGGTCCCTTAAATTGGAAACAACGGTATGATATAATTTTGGGCACAGCAAGAGGACTAGCATATCTACATGAAGATTTCCATGTCTCCATCATACATAGAGATATCAAAACTGCTAATATCCTTCTGGATGATGATCTTCAGCCTAAAATTGCTGATTTTGGGTTGGCAAGGCTTCTGCCAGAGGATCGTTCTCACCTTAGCACAAGATTTGCAGGAACATTGGGATACACAGCACCTGAGTATGCAATGCATGGTCAATTATCAGAGAAGGCTGATACCTACAGCTATGGTATTGTAGTCCTAGAAATAGTGAGTGGCCAAAAGAGTACAAATGTGAAAGAAGATGAGGAAGGTCGTGAATACCTTCTTCAACGAGCTTGGAGACTGTATGAGAGAGGCATGCAGTTGGAGCTTGTGGACGAGGCCATAGACCCTAATGAGTATGATGCAGAAGAAGTAAAGAAAACCATAGAAATAGCGTTGTTGTGCACTCAGGCATCAGCTGGAGCGAGACCAACAATGTCTGAAGCAGTAGTGCTACTGAAAAGCAAGAGCTTAGTAGACCACCTGCGACCAACCATGCCTGTGTTTGTTGAATCCAATTTGAAGTCTCGAGAAGACAATTCTAGGTCTGTCTCAACTACTGCTTCTTCATCCAATGCTACTGCCTCCGTTACTGTTCCATCAGCTCGATGA 2688 0.4208 MIRYSIFEIARLMMLKPNLLVLALICCCNINIVYAYGSVANPQTHLLNQRCSKYNASNLHSFFSSINGTFSRLKDQVNNHRKHFVTAELQARGKILIHTMFQCRNYLSRIDCLACFNTASTQIRNCSSAKGARVIYDGCFLRYERGRFYNETTEPDNGVSCGNMSSNATSFKLVAEQVLMELQTTAPKIKGFYAATKTEVAGGSAIYAIAQCVETATEHDCLQCMTVGYNNLRSCLPNTEGRAYDAGCFMRYSTTPFFADNQTIHITPYLDQVGNPQPHLLNKGCSPYNSSNLPSFFENLNKTFSSLKAQISNDQNKHFATANTTRGEVLTYAIFQCRNYLSKTECLACFNTASTQIRNCSAANGARIIYDACFLRYESESFYDQTTEPGNGASCGNTSAMVVGFSLVAQQVLMQLQTVTPKTKGFYAATKTKLVDGSAIYAVAQCVETAAENDCLKCMQVGYNNLQNCLSNNTSGTAYDAGCFMRYSTTPFFPDNQTIDITPYLTRGGSRKKWIIIGGVVGGGGLLLIILAVFAFRRSRKPKRFPRGDILGATELKGPVNYKYADLKGATQNFSNENKLGEGGFGDVYKGTLRNGKIVAVKKLVLGKSSKMEDDFESEVKLISNAHHRNLVRLLGCCIKGEERILVYEYMANSSLDRFLFGDRGPLNWKQRYDIILGTARGLAYLHEDFHVSIIHRDIKTANILLDDDLQPKIADFGLARLLPEDRSHLSTRFAGTLGYTAPEYAMHGQLSEKADTYSYGIVVLEIVSGQKSTNVKEDEEGREYLLQRAWRLYERGMQLELVDEAIDPNEYDAEEVKKTIEIALLCTQASAGARPTMSEAVVLLKSKSLVDHLRPTMPVFVESNLKSREDNSRSVSTTASSSNATASVTVPSAR 895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g01395 895 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 332 883 - -
Viun6g01395 895 ProSiteProfiles Gnk2-homologous domain profile. 278 382 IPR002902 -
Viun6g01395 895 MobiDBLite consensus disorder prediction 865 895 - -
Viun6g01395 895 Gene3D Phosphorylase Kinase; domain 1 550 650 - -
Viun6g01395 895 FunFam Cysteine-rich receptor-like protein kinase 2 538 650 - -
Viun6g01395 895 FunFam Cysteine-rich receptor-like protein kinase 2 390 492 - -
Viun6g01395 895 ProSiteProfiles Protein kinase domain profile. 574 861 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun6g01395 895 ProSitePatterns Protein kinases ATP-binding region signature. 580 603 IPR017441 GO:0005524
Viun6g01395 895 SUPERFAMILY Protein kinase-like (PK-like) 558 845 IPR011009 -
Viun6g01395 895 FunFam Cysteine-rich receptor-like protein kinase 2 651 853 - -
Viun6g01395 895 Pfam Salt stress response/antifungal 161 254 IPR002902 -
Viun6g01395 895 Pfam Salt stress response/antifungal 51 144 IPR002902 -
Viun6g01395 895 Pfam Salt stress response/antifungal 405 489 IPR002902 -
Viun6g01395 895 Pfam Salt stress response/antifungal 289 379 IPR002902 -
Viun6g01395 895 Gene3D - 278 382 IPR038408 -
Viun6g01395 895 Gene3D - 394 492 IPR038408 -
Viun6g01395 895 Gene3D - 157 257 IPR038408 -
Viun6g01395 895 Gene3D - 43 148 IPR038408 -
Viun6g01395 895 ProSiteProfiles Gnk2-homologous domain profile. 387 492 IPR002902 -
Viun6g01395 895 FunFam Cysteine-rich receptor-like protein kinase 2 277 382 - -
Viun6g01395 895 SMART serkin_6 574 851 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun6g01395 895 ProSiteProfiles Gnk2-homologous domain profile. 153 257 IPR002902 -
Viun6g01395 895 MobiDBLite consensus disorder prediction 871 895 - -
Viun6g01395 895 ProSitePatterns Serine/Threonine protein kinases active-site signature. 694 706 IPR008271 GO:0004672|GO:0006468
Viun6g01395 895 CDD STKc_IRAK 580 846 - -
Viun6g01395 895 Gene3D Transferase(Phosphotransferase) domain 1 651 856 - -
Viun6g01395 895 FunFam Cysteine-rich receptor-like protein kinase 2 156 257 - -
Viun6g01395 895 Pfam Protein kinase domain 575 841 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun6g01395 895 ProSiteProfiles Gnk2-homologous domain profile. 44 148 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g01395 Viun-Chr6 22573809 22578618 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g01395 274 882 Receptor kinase-like Gene Family AT1G70520 37.560 1.16e-118 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Viun6g01395 Pkinase 7.7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g01395 - - vun:114187094 1753.41