Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g01381 ATGTCAAACCGAGTTTGCATAAAAAAAGGGTATTTGCCACTAATGGGTGTGAAGTTTATGGGCAGACTGGAACACCCAACTCGTTTTCCCATGTGTGTTCGATCCAAAACAACGTCTGCTCAGTATGTAGCATCGAGATTTCGAGACCCCACGTTTGAGAAACTCATGGACAACTACAAAAACCTTGTTAAGGTCATTTCCATTCAAGACCTCATCCTTGCAAACCCAAAGAACCAATCAGTCTCCATTGATTTCCTCTCGAAGCTCTCTCAGAAGCTCCACTTAAACCGTGGGGCCACTGCCTTCCTCCGCAAGTTTCCTCACATCTTCCACATTTACTATGATCATTCCAAGTTGAAGCCCTTTTGCCGGTTAACTGACGCTGCTCTAGGTGTTACACGGCAGGAAGCGGTGGCCATCAATGCTTCTTTGCCTGTTGTTGTTGAAAGGCTTGTCCGGATACTATCCATGTCAGCATCCAGAATGGTGCCTCTTAGAGCTGTTTTTAAGGTTTGGAAGGAGCTTGGGCTGCCTGATGATTTCGAGGACTCTGTTATATCTGCTAATTCTGGTGTTTTTCAGCTGTGTGATGGCCATGAACAGAATACTCATTTGTTGAAGCTGGTTGATGGTGTTTCCAGAAATGGCATTAGGGCGGCTGTTGAGGATTGGAGGGTTGTTGAGTGCTGCAAGGAGGACTGCAGTGTTGATAGGACGGAAATGCAGTTCAGTTTCAAACAGGGGTATCCTCCGGGGATGAGGTTGAGCAAGAATTTCAAGGCCAAGGTGAAGGAGTGGCAGAGGTTGCCTTATGTGGGGCCTTATGAAGTGCCGGGTGAGAAGAAGAAGTCTAAGGCTGGAATGATGGCCATGGAGAAGCGAGCAGTGTCAATTGTTCATGAGTTCCTGAGTTTGACAGTGGAGAAGATGGTGGAAGTTGAGAAGATCAGCCAGTTTAGGAAATGGTTTGGAATTGATTTAAATATAAGGGATCTCTTCTTGGACCACCCAGGGATCTTCTATTTGTCAACTAAGGGCAAAAGACATACTGTTTTCCTGAGGGAAGCTTATGAACGAGGGCGCTTGATAGAACCAAATCCTGTCTATGATGCAAGAAGACGGCTCCTTGATCTTGTTGTTTTAGGACGTCGGGGTTTGCCAGCTGTTAATTCGAAGTTGGAGGATTCAAGCAGCTGCCACCAGGCTAGACAAGAGGAAAACCAGCAAAGACATGATTTGTCACCATCTTGA 1251 0.4612 MSNRVCIKKGYLPLMGVKFMGRLEHPTRFPMCVRSKTTSAQYVASRFRDPTFEKLMDNYKNLVKVISIQDLILANPKNQSVSIDFLSKLSQKLHLNRGATAFLRKFPHIFHIYYDHSKLKPFCRLTDAALGVTRQEAVAINASLPVVVERLVRILSMSASRMVPLRAVFKVWKELGLPDDFEDSVISANSGVFQLCDGHEQNTHLLKLVDGVSRNGIRAAVEDWRVVECCKEDCSVDRTEMQFSFKQGYPPGMRLSKNFKAKVKEWQRLPYVGPYEVPGEKKKSKAGMMAMEKRAVSIVHEFLSLTVEKMVEVEKISQFRKWFGIDLNIRDLFLDHPGIFYLSTKGKRHTVFLREAYERGRLIEPNPVYDARRRLLDLVVLGRRGLPAVNSKLEDSSSCHQARQEENQQRHDLSPS 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g01381 416 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 34 401 IPR045040 GO:0003723
Viun6g01381 416 MobiDBLite consensus disorder prediction 393 416 - -
Viun6g01381 416 MobiDBLite consensus disorder prediction 398 416 - -
Viun6g01381 416 Pfam Plant organelle RNA recognition domain 48 383 IPR021099 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g01381 Viun-Chr6 22510125 22513331 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g01381 - - gmx:100808404 735.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun6g01381 6 22510125 22513331 Viun6g01381 6 22510125 22513331 ECH
Viun6g01381 6 22510125 22513331 Viun7g02046 7 25336506 25339473 PCT