Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g01302 ATGGATATCTTAGGAAAAGTTCTATCCGCGCTCTTCTTTGCGGCGGTGATTGCTGTGACCGCTGCAAAGCTCCGCGGGAAGCGGTTCAGGCTGCCGCCGGGACCGTTTCCTGTACCGATATTTGGTAACTGGCTTCAGGTCGGCGATGACCTGAACCACCTTAACCTCGCCGACATTGCGCGTCGCTATGGCGACATATTTCTCCTCCGCATGGGGCAGCGGAATTTGGTGGTGGTCTCTTCGCCGGAGCTCGCGAAGGAGGTTCTCCAAACGCAGGGCGTGGAGTTCGGCTCGCGCACGCGCAACGTCGTCTTCGACATCTTCACCGGGAAAGGCCAGGACATGGTGTTCACCGTGTACGGCGAGCACTGGCGCAAGATGCGCCGCATCATGACGGTCCCGTTCTTCACGAACAAGGTCGTGCAGCAGTACCGCGTCGGGTGGGAGGACGAGGCGGCGCGTGTGGTGGAGGACGTACGCCGCAACCCCGACGCCGCGGTGGGAGGGATCATTCTGCGGCGGAGACTGCAACTCATGATGTATAATATCATGTATAGGATCATGTTCGATAGAAGGTTCGAGAACGAGGAGGACCCGTTGTTTCAGAAGCTTCGGGTTTTGAACGGTGAGAGGAGTCGTTTGGGGCAGAGTTTTGAGTACAACTACGGTGATTTTATCCCCATTCTACGACCATTTTTGCGTGGGTACTTGAAGATTTGCAAGGAGGTTAAGGACACAAGGTTCAAACTCTTCAAGGATTATTTCATCGAGGAACGAAAGAATCTTGAAAATACCAAGAAAAGGGACAATGGAGGACTTAAATGCGCCATCGATCACATTTTGGATGCTCAGAAAAAAGGAGAGATTAGCGAGGATAATGTCCTTTACATTGTTGAAAACATTAACGTTGCTGCAATTGAGACAACTCTGTGGTCAATAGAATGGGGCATTGCTGAGCTTGTGAACCACCCAGAGATCCAAAAGAAGGTGAGGGAGGAGATTGAGAGAGTTGTAGGAGCAGGAAAGCAAGTGACAGAGCAAGACAGTGAGAAGCTACCTTACCTTGAGGCAGTGATAAAGGAAACACTTCGTCTGAGAATGGCAATTCCACTCCTTGTCCCACACATGAACCTCCATGATGCTAAACTTGGAGGTTATGATATCCCTGCAGAGAGCAAGATGTTGGTGAATGCATGGTGGCTTGCCAACAACCCTGCTAAGTGGAAGAAGCCCGAGGAGTTCAGGCCTGAGAGGTTCTTGGAGGAAGAGTCCAAAGTAGAGGCCAATGGGAATGACTTGAGATACCTTCCTTTTGGTGTTGGGAGGAGAAGCTGCCCTGGAATTATCCTTGCATTGCCTATTATGTGCATTACTTTGGGGCGTTTGGTCCAAAATTTTGAGCTCTTGCCTCCCCCAGGACAACATATGCTTGATACCACTGAGAAAGCAGGCCAGTTTAGTCTGCACATACTCAAACACTCAACCATTGTCGCAAAGCCAAGATCATTTTAA 1512 0.5053 MDILGKVLSALFFAAVIAVTAAKLRGKRFRLPPGPFPVPIFGNWLQVGDDLNHLNLADIARRYGDIFLLRMGQRNLVVVSSPELAKEVLQTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRVGWEDEAARVVEDVRRNPDAAVGGIILRRRLQLMMYNIMYRIMFDRRFENEEDPLFQKLRVLNGERSRLGQSFEYNYGDFIPILRPFLRGYLKICKEVKDTRFKLFKDYFIEERKNLENTKKRDNGGLKCAIDHILDAQKKGEISEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKVREEIERVVGAGKQVTEQDSEKLPYLEAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKMLVNAWWLANNPAKWKKPEEFRPERFLEEESKVEANGNDLRYLPFGVGRRSCPGIILALPIMCITLGRLVQNFELLPPPGQHMLDTTEKAGQFSLHILKHSTIVAKPRSF 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g01302 503 SUPERFAMILY Cytochrome P450 32 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g01302 503 PANTHER TRANS-CINNAMATE 4-MONOOXYGENASE 6 502 - -
Viun6g01302 503 CDD CYP73 61 494 - -
Viun6g01302 503 FunFam Trans-cinnamate 4-monooxygenase 21 495 - -
Viun6g01302 503 Gene3D Cytochrome P450 21 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g01302 503 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Viun6g01302 503 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g01302 503 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g01302 503 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g01302 503 Pfam Cytochrome P450 32 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g01302 503 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g01302 503 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g01302 503 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g01302 503 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g01302 503 PRINTS E-class P450 group I signature 397 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g01302 503 PRINTS E-class P450 group I signature 179 197 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g01302 503 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g01302 503 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g01302 503 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g01302 Viun-Chr6 22074599 22077465 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g01302 3 502 Monolignol Biosynthesis Gene Families AT2G30490 79.000 0.0 815
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g01302 K00487 - nnu:104593756 881.322