Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g01291 ATGGGTTACGATCCCTATATTTCATGTCTGCACCTTCAATCCCTTCTCATTTCTTTATTAGTTGTGATTTGTGGTTTTACTATCATCAAAGTCTTCAAAAATCACATAATTCAGAAGCCTAAACTGCCTCCAGGTCCTAAACCCTGGCCTATAGTTGGTAATCTTCCTGAAATGCTTTCAAACAAACCTGTTTTTCAATGGATTCACAACCTCATGCAAGATATGAACACTGAAATTGCATGCATTCGTCTAGGAAATGTCCATGTAATCCCTGTCACATGTCCCTCCATAGCATGTGAGTTTTTGAGAAAGCATGATGCTGAGTTTGCATCAAGACCACTGACAATGGCCACTGATATCATGTCCAGTGGTTATGTGACCATAGCTATTGTACCCTTTGGGGAGCAATGGAAGAAAATGAGGAGAATCTTCGTCAACGACTTGTTCTCCCCTCTCAGGCACCACTCATTCCAACACAAAAGGAACGAAGAAGCTGATAACATCATGTTTTATGTCTACAACAGATGCAACAATGTGAACGGTAAGGGCCTCGTGAATGTGAGGGATGTTACACAACACTATTGCTGCAATGTGACGAGAAAAATGATTTTTAACACAAGGTACTTTGGAAAGGGTAGGGTGGATGGAGGGCCAGGGCCAGAGGAAGTAGAACAAGTGAACGCCATTTTCAAATTGCTTAAACACGTTTATGCATTTTCTGTTTCTGATTATGTGGCGTGGTTGAGGGCTTTTGATTTGGATGGGCACAAGAGGAAGGTGAAGGAAGGAATGAGAAGGATGGAGAAGTATCATGATCCGATGATTGAAGAGAGAATGAAGCAATGGAAGAATGGAGCAAAGAGCGTTGAAGAAGACTTGTTGGATGTTCTCATATCACTCAAAGATCACAATAATAATCCTACTTTGACAACCAAGGAAATCAAGGCGCTTACGATAGAACTAATGCTCGGAGGTGCAGACAATCCATCTAATGCAGTTGAATGTACCCTTGCAGAAATGGTAAATCAACCCCATATACTTCAACAAGCTATTGATGAAGTAGACAAGGTTGTAGGTAAGCAAAGAATGGTACAAGAATCAGATATTCCAAATCTCAATTATTTAAAGGCTTGTTTGAGAGAAGCCTTTCGCCTTCATCCTGTGGTACCCTTTAATCCTCCCCATGTCTCAAGCAATGACACAATGGTGGCAAACTATTTTATTCCAAAGGGTAGCCATGTACTGCTAAGCAGACTTGGACTTGGACGAAACCCTAAAGTGTGGAGTGAACCTCACAAGTTCAAACCTGAACGCCATCAAAAGAGTGATGGATCTATGGTTGTTTTGTCAGAACTTGACTTGAAGTTCATATCATTTGGCACAGGAAGAAGAGGTTGTCCTGCAATCATACTTGGGTCCACCATGACTGTGATGTTATTGGCCAGGTTGATCCATGCATTTTCCTGGAGTGCACCCCCCAATTTATCAAGTATCAACACTTTTAAGTCTGATAGTGGTGGTATGCTTGCTGAACCACTTGTTTTAGAAGCCAAACCAAGATTAGCATCAAAGTTGTATTACAATTAA 1587 0.4115 MGYDPYISCLHLQSLLISLLVVICGFTIIKVFKNHIIQKPKLPPGPKPWPIVGNLPEMLSNKPVFQWIHNLMQDMNTEIACIRLGNVHVIPVTCPSIACEFLRKHDAEFASRPLTMATDIMSSGYVTIAIVPFGEQWKKMRRIFVNDLFSPLRHHSFQHKRNEEADNIMFYVYNRCNNVNGKGLVNVRDVTQHYCCNVTRKMIFNTRYFGKGRVDGGPGPEEVEQVNAIFKLLKHVYAFSVSDYVAWLRAFDLDGHKRKVKEGMRRMEKYHDPMIEERMKQWKNGAKSVEEDLLDVLISLKDHNNNPTLTTKEIKALTIELMLGGADNPSNAVECTLAEMVNQPHILQQAIDEVDKVVGKQRMVQESDIPNLNYLKACLREAFRLHPVVPFNPPHVSSNDTMVANYFIPKGSHVLLSRLGLGRNPKVWSEPHKFKPERHQKSDGSMVVLSELDLKFISFGTGRRGCPAIILGSTMTVMLLARLIHAFSWSAPPNLSSINTFKSDSGGMLAEPLVLEAKPRLASKLYYN 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g01291 528 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 459 468 IPR017972 GO:0005506|GO:0016705
Viun6g01291 528 PRINTS E-class P450 group I signature 194 212 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g01291 528 PRINTS E-class P450 group I signature 313 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g01291 528 PRINTS E-class P450 group I signature 333 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g01291 528 PRINTS E-class P450 group I signature 417 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g01291 528 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g01291 528 PRINTS E-class P450 group I signature 376 394 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g01291 528 PRINTS E-class P450 group I signature 97 118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g01291 528 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g01291 528 FunFam Cytochrome P450 9 35 524 - -
Viun6g01291 528 Pfam Cytochrome P450 43 504 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g01291 528 SUPERFAMILY Cytochrome P450 43 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g01291 528 Gene3D Cytochrome P450 37 524 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g01291 528 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 13 527 - -
Viun6g01291 528 CDD CYP79 77 521 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g01291 Viun-Chr6 22033187 22035225 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g01291 42 526 Cytochrome P450 AT5G05260 54.806 0.0 566
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g01291 - K14984 vra:106774791 922.154