Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g01287 ATGGGCCACACCCCATTTCTTCGACTCTCAAATCTTCGAAGCTTTTGGTCATCTTTGGTTGTGATAATAACATGCTTCACCATTATTATGATGAAAAGCATAAGGTATAACTTCATCCACAGTTATTCCATGAAGCAAAAGCCAAACCTCCCTCCTGGACCCAAACCATGGCCTATAGTAGGCAACCTTCCTCAAATGCTTGCAAACAAACCTGCTCATAAGTGGATACATAATCTCATGAAACAAATGAACGCTGAAATTGCATGTATCCGCTTAGGAAATGTCTACGTTATCCCAGTCACATGTCCCACCATAGCTACTGAGTTCCTGAGAAAACAAGATGCAACTTTTGCATCAAGATCATTCAGCGTCGCCACTGATCTCGTCTCTACTGGATACTCAACCACAGCTCTTGTGCCCTTTGGTGAGCAGTGGAAGAAAATGAAGAAAATCGTAACCAACCATTTGCTTTCTCCACTCAAGCACCTATGGCTTCACCACAAAAGAACTGAAGAAGCTGATAACCTTATGTTTTACGTCTACAACAAGTGCAAGATGATGAACGATGGTACTTATGGCTTTGTGAATGTTAGGAATGTTGCAAGGCATTATTGTGACAATCTTATCAGAAAAAATACTTTCAAGGTAAGGTATTTTGGGGAGGGCAGAGAGGATGGAGGGCCCGGTTTTGAGGAAGCAGAACCTGTTGATTCCATCTTTGATTTGCTCAACTACGTTTGTTGCTTTTCCGTTTCTGATTATATGCCATTCTTGAGGGAACTTGACTTGGATGGCCATCAGAAGAAAGTGAGGGAAGCTCTGAGGATCATCAAGAAGTATCATGATCCCATCGTTCAACACAGAATCAAACAATGGAATGATGGATTAAAGATTCATGAAGAGGACTGGCTTGATGTTCTCATCTCTCTCAAAGATTCCGACAATAACCCATCGTTAACATTCGAAGAGATCAGTGCACAAATCATAGAATTGATGCTTGCAACAGTGGACAATCCATCGAATGCATTTGAATGGGCACTTGCTGAGATGATTAACCAACCTGAGTTGCTCCGTCGAGCTGTCCAAGAATTGGACAGTGTGGTAGGAAAAGACAGGCTGGTCCAAGAATCAGACATACCTAAGCTCAACTACGTGAAGGCTTGTGCAAAAGAAGCTTTTCGTCTTCATCCAATTGCACCTTTTATTCCTCCGCATGTCTCTATGAGTGACACAGTGGTGGGAAATTACTTCATCCCTAAAGGTAGCCACGTAGTGCTAAGCAGACAAGAACTTGGAAGAAACCCAAAAGTGTGGAATGAACCCTACAAGTTCAAACCTGAACGCCACTTGAAGAGTGATGCAGATGATGTGGCTTTGACTGAACCAAATATGAAGTTCATATCATTTAGCACAGAAAGACGAAGTTGTCCCGGAGTGATGCTAGGAACGACAATGACAGTGATGCTATTCGCTAGATTGCTGCATGGCTTCACTTGGACTGCACCAACCAATGTTTCAACTATTAATCTTTCCGAGTCAGACGATGATATACTTCTTGCACAACCACTTCTGGTAATTGCTCAGCCAAGATTACCACCAAAGTTGTACCACCTCTAA 1617 0.4242 MGHTPFLRLSNLRSFWSSLVVIITCFTIIMMKSIRYNFIHSYSMKQKPNLPPGPKPWPIVGNLPQMLANKPAHKWIHNLMKQMNAEIACIRLGNVYVIPVTCPTIATEFLRKQDATFASRSFSVATDLVSTGYSTTALVPFGEQWKKMKKIVTNHLLSPLKHLWLHHKRTEEADNLMFYVYNKCKMMNDGTYGFVNVRNVARHYCDNLIRKNTFKVRYFGEGREDGGPGFEEAEPVDSIFDLLNYVCCFSVSDYMPFLRELDLDGHQKKVREALRIIKKYHDPIVQHRIKQWNDGLKIHEEDWLDVLISLKDSDNNPSLTFEEISAQIIELMLATVDNPSNAFEWALAEMINQPELLRRAVQELDSVVGKDRLVQESDIPKLNYVKACAKEAFRLHPIAPFIPPHVSMSDTVVGNYFIPKGSHVVLSRQELGRNPKVWNEPYKFKPERHLKSDADDVALTEPNMKFISFSTERRSCPGVMLGTTMTVMLFARLLHGFTWTAPTNVSTINLSESDDDILLAQPLLVIAQPRLPPKLYHL 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g01287 538 PRINTS E-class P450 group I signature 386 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g01287 538 PRINTS E-class P450 group I signature 466 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g01287 538 PRINTS E-class P450 group I signature 476 499 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g01287 538 PRINTS E-class P450 group I signature 427 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g01287 538 PRINTS E-class P450 group I signature 105 126 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g01287 538 PRINTS E-class P450 group I signature 323 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g01287 538 PRINTS E-class P450 group I signature 343 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g01287 538 SUPERFAMILY Cytochrome P450 51 530 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g01287 538 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 20 537 - -
Viun6g01287 538 Pfam Cytochrome P450 51 521 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g01287 538 FunFam Cytochrome P450 9 43 534 - -
Viun6g01287 538 Gene3D Cytochrome P450 43 532 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g01287 538 CDD CYP79 86 531 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g01287 Viun-Chr6 21968062 21969793 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g01287 45 536 Cytochrome P450 AT4G39950 53.550 0.0 561
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g01287 - K14984 gmx:100809902 900.197