Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g01286 ATGCCTCACACCTCATTTCTTCTGCTGTCAAATCTTCAAAGCTTTTGGCCTTCTTTGCTTGTGATAATCACCTGCTTCACCATTACAATCAAAACCCTAAGGTATAACTTCATCCAAAATTATTCCAAGAAACAAAAGCCAAACCTCCCTCCTGGACCCAAACCATGGCCTATAGTAGGCAACCTTCCTGAAATGCTTGCAAGCAAACCTGCATACAAGTGGATACATAATCTCATGAAACAAATGAACACTGAAATTGCATGTATCCACTTAGGAAATGCCTATGTTATCCCAGTCACATGTCCCACCATTGCTACTGAGTTCTTGAGAAAACAAGATGCAACTTTTGCATCAAGATCATTCAGCGTCGCCACTGATCTCATTACTAGTGGATATTCAACCACAGTTCTTGTGCCCTTTGGTGAGCAGTGGAAGAAAATGAAGAAAATCATAACCCACGATTTGCTTTCTCCACACAAGCACCTATGGCTTCACGACAAAAGGACTGAAGAAGCTGATAATCTTATGTTTTACGTCTACAACAAGTGCAAAATGGTGAACGATGGTACTTATGGCCTTGTAAATGTTAGGAATGTTGCAAGGCATTATTGTGGCAACCTCGTCAGAAAAATTACTTTTAATTCAAGGTATTTTGGGGAGGGTAGAGAGGATGGAGGGCCCGGTTTCGAGGAAGCAGAACATGTTGATTCCATCTTTGATTTGCTCAACTACGTCTATTCCTTTTCTGTTTCTGATTATATGCCATGCTTGGCAAGACTTGATTTGGATGGTCATCAGAAGAAAGTGAAGGAAGCTCTGAGGAAGATTAAGAAGTATCATGACCCCATTGTTCAACAGAGAATTAAACAATGGAATCATGGATTAAAGGTTGATGCAGAGGATTGGCTTGATGTTCTCATTTCTCTGAAAGATGCTAACAATAATCCATCGTTAACAATGGAAGAGATCAGTGCACAAATCATAGAATTGATGCTTGCAACAGTGGACAATCCATCGAATGCATTTGAATGGGCACTTGCTGAGATGATTAACCAACCTGAGCTGCTCCGTCGAGCTGTCGAAGAATTGGACAGTGTGGTAGGAAAAGACAGGCTGGTCCAAGAATCAGACATACCTAAGCTCAACTATGTCAAGGCTTGTGCAAAAGAAGCTTTTCGTCTTCATCCAATTGCACCTTTTATTCCTCCGCATGTCTCTATGAGTGACACAGTGGTGGGAAATTACTTCATCCCTAAGGGTAGCCATGTAGTACTAAGCAGACAAGAACTTGGAAGAAACCCAAAAGTGTGGAATGAACCCTACAAGTTCAAACCTGAACGCCACCTGAAGAGTGATGCAGATGATGTGGTTTTGACTGAACCAAATCTGAAGTTTATATCATTTGGCACAGGAAGACGAGGTTGTCCCGGAGTGATGCTAGGAACGACAATGACAGTGATGCTATTCGCTAGATTGCTGCATGGCTTCACTTGGACTGCACCACCCAATGTTTCAACGATTAATCTTTCTGAGTCAGACGATGATATCCTTCTTGCACATCCACTCGTGGCAATTGCTCAGCCAAGGTTACAACCAAAGCTATACCAACGGGTAAATAGATCTTAA 1626 0.4188 MPHTSFLLLSNLQSFWPSLLVIITCFTITIKTLRYNFIQNYSKKQKPNLPPGPKPWPIVGNLPEMLASKPAYKWIHNLMKQMNTEIACIHLGNAYVIPVTCPTIATEFLRKQDATFASRSFSVATDLITSGYSTTVLVPFGEQWKKMKKIITHDLLSPHKHLWLHDKRTEEADNLMFYVYNKCKMVNDGTYGLVNVRNVARHYCGNLVRKITFNSRYFGEGREDGGPGFEEAEHVDSIFDLLNYVYSFSVSDYMPCLARLDLDGHQKKVKEALRKIKKYHDPIVQQRIKQWNHGLKVDAEDWLDVLISLKDANNNPSLTMEEISAQIIELMLATVDNPSNAFEWALAEMINQPELLRRAVEELDSVVGKDRLVQESDIPKLNYVKACAKEAFRLHPIAPFIPPHVSMSDTVVGNYFIPKGSHVVLSRQELGRNPKVWNEPYKFKPERHLKSDADDVVLTEPNLKFISFGTGRRGCPGVMLGTTMTVMLFARLLHGFTWTAPPNVSTINLSESDDDILLAHPLVAIAQPRLQPKLYQRVNRS 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g01286 541 Gene3D Cytochrome P450 36 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g01286 541 PRINTS E-class P450 group I signature 465 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g01286 541 PRINTS E-class P450 group I signature 426 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g01286 541 PRINTS E-class P450 group I signature 385 403 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g01286 541 PRINTS E-class P450 group I signature 322 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g01286 541 PRINTS E-class P450 group I signature 203 221 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g01286 541 PRINTS E-class P450 group I signature 475 498 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g01286 541 PRINTS E-class P450 group I signature 342 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g01286 541 PRINTS E-class P450 group I signature 104 125 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g01286 541 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 468 477 IPR017972 GO:0005506|GO:0016705
Viun6g01286 541 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 22 536 - -
Viun6g01286 541 FunFam Cytochrome P450 9 42 533 - -
Viun6g01286 541 SUPERFAMILY Cytochrome P450 50 529 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g01286 541 Pfam Cytochrome P450 50 518 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g01286 541 CDD CYP79 84 530 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g01286 Viun-Chr6 21952898 21954866 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g01286 4 538 Cytochrome P450 AT4G39950 51.866 0.0 582
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g01286 - K14984 gmx:100809902 945.651