Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g01283 ATGGTTGTGGGGATATCCTTCTTTGTCCTATTTTCATCCACTTTGAGTCTAGCTTTTCTACTCTCAAAATGGTTCTCAAAAGGTCAAACAAAAAATGTTCCAAAAGGGTCTCTGGGGTACCCTATCATCGGAGAGACCCTTAGTTTTCTTAAAGCACAGAGACAAGACAAGGGTGGTTCTGATTGGTTGGAAGAACGGATATCTAAGTATGGTCCTGTCTTCAAAACCTGCCTAATGGGGTCCCCCACAGTGTTTGCAATTGGACAAGCAGGAAACAAATTTATCCTTGCTTCACCAGATGATGTTCTTTCTGCTAAGAAACCCCTCACCATGAAAAAGATATTTGGAAGACAAAGCTTGGTTGAACTCACAGGACACAGATACAAGTTGGTGAAGGGGGAAATGCTGAAGTTCTTGAAACCTGAATGCCTTCAGAACTATGTAAAAAAGATGGATGAATTGGTGAATGCTACATTAGTGAGAGAAGTGACAGAGAAAGAAACAATGGGAGTTGTGGTCTTCATGAAGAAACTGTCTTATGATTTATCATGCAATATATTGTTTGACATTAAGGATGAGCAGAGCAGAGAGGCTTTGTTTGTGGATTTCACTTTAGCATTTAAAGCAATTCATTCTCTTCCCATCAATTTCCCTGGCACCACATTTTGGAGAGGCCAAAAAGCCAGGGCAAGAATTGTTGACAGAATGATTCCTATTATGAACAAAAGAAGGGAGGAAGTGTCTAAAGGAGTTGTGAGCTCTACCAATGACATGCTTTCTGGCTTGCTTGCACTAAGGGATGAACATCATCAACCTCTGGCACATGATTTAATCACAGACAATTTTATATTTTTACTTGTTGCTAGTCATGACACATCTGCCACTCTTATGAGCTTGATGATATGGAAGTTATCTAGAGATCCAGAAGTTTACAAAAGAGTTCTAGAAGAACAAATGGAAATTATAAAGCATAGGGAAGGAACAGAAGAGAGGCTAACATGGGAAGAGATTCAAAAGATGAAATATACATGGAGAGTGGCTCAGGAACTGATGAGGATGATCCCTCCCTTGTTTGGAAGCTTTAGGAAAGCACTTAAAGATACTAGCTTTCAAGGATATGACATACCCAAAGGGTGGCAGGTGTATTGGGCAGCATATGGAACCCATATGAACGATGATGTATTTGAGAATCCACGGAAGTTTGAACCATCTCGTTTTGAGAATCCGACAAAGCCAATTCCACCATATTCTTACCTTCCATTTGGTGCAGGGATTCATTACTGCATAGGGAACGAGTTTGCAAGGATTGAGACCTTGACAACTATTCACAACTTTGTGAAACTGTTTGAATGGTCTCAAGTAAACCCAGAAGAACCAATTACCCGTCAACCAATGCCATATCCATCAATGGGTCTCCCAATTAAGATCAAACCCAGATCTAATATGTCTTGA 1452 0.4022 MVVGISFFVLFSSTLSLAFLLSKWFSKGQTKNVPKGSLGYPIIGETLSFLKAQRQDKGGSDWLEERISKYGPVFKTCLMGSPTVFAIGQAGNKFILASPDDVLSAKKPLTMKKIFGRQSLVELTGHRYKLVKGEMLKFLKPECLQNYVKKMDELVNATLVREVTEKETMGVVVFMKKLSYDLSCNILFDIKDEQSREALFVDFTLAFKAIHSLPINFPGTTFWRGQKARARIVDRMIPIMNKRREEVSKGVVSSTNDMLSGLLALRDEHHQPLAHDLITDNFIFLLVASHDTSATLMSLMIWKLSRDPEVYKRVLEEQMEIIKHREGTEERLTWEEIQKMKYTWRVAQELMRMIPPLFGSFRKALKDTSFQGYDIPKGWQVYWAAYGTHMNDDVFENPRKFEPSRFENPTKPIPPYSYLPFGAGIHYCIGNEFARIETLTTIHNFVKLFEWSQVNPEEPITRQPMPYPSMGLPIKIKPRSNMS 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g01283 483 Gene3D Cytochrome P450 25 479 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g01283 483 PRINTS P450 superfamily signature 345 356 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g01283 483 PRINTS P450 superfamily signature 288 305 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g01283 483 PRINTS P450 superfamily signature 419 428 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g01283 483 PRINTS P450 superfamily signature 428 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g01283 483 Pfam Cytochrome P450 34 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g01283 483 CDD CYP90-like 66 478 - -
Viun6g01283 483 PANTHER CYTOCHROME P450 26 32 468 - -
Viun6g01283 483 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 421 430 IPR017972 GO:0005506|GO:0016705
Viun6g01283 483 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g01283 483 PRINTS E-class P450 group I signature 418 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g01283 483 PRINTS E-class P450 group I signature 384 408 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g01283 483 PRINTS E-class P450 group I signature 428 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g01283 483 PRINTS E-class P450 group I signature 297 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g01283 483 FunFam Taxadiene 5-alpha hydroxylase 24 479 - -
Viun6g01283 483 SUPERFAMILY Cytochrome P450 31 479 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g01283 Viun-Chr6 21923671 21926699 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g01283 1 454 Cytochrome P450 AT4G19230 30.853 1.22e-69 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g01283 - - gmx:100790209 835.869