Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g01282 ATGGCCACACAGACGCAAGATTCACCTTCAAACCCTAATCCCAATGCCACATCACTAACGCCGTCTTCTTCGTTGTTCTTTCGCGGCGCCGGTGCTTCCGCTGCTCCTGTCGCCGGCTCCGGTGAGTCCCACTCGCACCACCGGAGAGCACTCTCGGAAGTCAGTTACCGGCTTCCGGATGACATGATGGACCTCTCGCCGTCGGATCCGTTCAACGGCGGATCCTCGACGGCGAGCCTAGAGGAGATCGGATCCGAAGACGACCTCTTCTCCACCTACATTGACGTTGAAAAGCTCGGCAGCAGCACTAACGGCGCCGGCCGTGGAAACGGATCGGATCAGAGTGGTTATGGAAACGGTACTAACGGACACCATGACAGCGAGAAGAGTCCGAGAGATGAAGAGCGGCCGAGACACCGGCACAGTAGCTCCGTCGACGGTTCTTCGTCGACTAACATGTTCGGAGAGATCATGGAAGCAAAGAAAGCAATGCCTCCCGATAAACTAGCTGAACTTTGGAACATTGATCCAAAGCGTGCCAAGAGAATACTAGCTAATCGGCAATCTGCTGCGCGTTCAAAGGAAAGAAAGGCGCGCTATATACAAGAACTAGAGCGCAAAGTTCAGACCCTCCAAACCGAGGCAACAACACTTTCTGCCCAACTCACATTGTACCAGAGGGATACAACTGGTCTGAGTAGTGAAAATACCGAGCTTAAGCTCCGTCTGCAAGCCATGGAGCAACAGGCACAACTTCGTGATGCTCTTAATGATGCATTGATGAAGGAAGTTGAGAGGCTCAAGATGGCTACTGGCGAGGTATTGAACAACCACTCTGAGTCTTTCAATATGGGAATGCACCAGATGCCATTTGCAGGGTCAAATTTCTTTTCAATCCCACCACATTCAGGTCCTTCTAGTCACCAGAACATGCAGTTGCCTCCATATGGTATCTCCCAATCTAGCATGCCAGCTCATCAGCTGCAACAAACACATTCTCACCAAATCTCAGATATATTGCAAAACGACCAGCTTGGTCGTTTGCAGGGACTTGACATTAGTAGCAAAGGATCATCCTTTGTGAAATCTGAAGGCCCCTCAATATCAGCAAATGATAGTAGTACCACGTTTTGA 1134 0.5053 MATQTQDSPSNPNPNATSLTPSSSLFFRGAGASAAPVAGSGESHSHHRRALSEVSYRLPDDMMDLSPSDPFNGGSSTASLEEIGSEDDLFSTYIDVEKLGSSTNGAGRGNGSDQSGYGNGTNGHHDSEKSPRDEERPRHRHSSSVDGSSSTNMFGEIMEAKKAMPPDKLAELWNIDPKRAKRILANRQSAARSKERKARYIQELERKVQTLQTEATTLSAQLTLYQRDTTGLSSENTELKLRLQAMEQQAQLRDALNDALMKEVERLKMATGEVLNNHSESFNMGMHQMPFAGSNFFSIPPHSGPSSHQNMQLPPYGISQSSMPAHQLQQTHSHQISDILQNDQLGRLQGLDISSKGSSFVKSEGPSISANDSSTTF 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g01282 377 MobiDBLite consensus disorder prediction 299 335 - -
Viun6g01282 377 MobiDBLite consensus disorder prediction 96 124 - -
Viun6g01282 377 SMART brlzneu 174 238 IPR004827 GO:0003700|GO:0006355
Viun6g01282 377 MobiDBLite consensus disorder prediction 125 143 - -
Viun6g01282 377 MobiDBLite consensus disorder prediction 1 27 - -
Viun6g01282 377 FunFam probable transcription factor PosF21 177 230 - -
Viun6g01282 377 Pfam bZIP transcription factor 178 236 IPR004827 GO:0003700|GO:0006355
Viun6g01282 377 Coils Coil 194 221 - -
Viun6g01282 377 MobiDBLite consensus disorder prediction 356 377 - -
Viun6g01282 377 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 5 362 - -
Viun6g01282 377 MobiDBLite consensus disorder prediction 1 152 - -
Viun6g01282 377 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 176 239 IPR004827 GO:0003700|GO:0006355
Viun6g01282 377 CDD bZIP_plant_RF2 179 228 IPR044759 GO:0003700|GO:0006355
Viun6g01282 377 SUPERFAMILY Leucine zipper domain 178 229 IPR046347 GO:0003700|GO:0006355
Viun6g01282 377 Gene3D - 178 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g01282 Viun-Chr6 21912714 21916202 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g01282 7 377 bZIP Transcription Factor Family AT2G40620 50.868 1.32e-102 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Viun6g01282 bZIP_1 3.4e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g01282 - - gmx:100775607 610.912
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun6g01282 6 21912714 21916202 Viun6g01282 6 21912714 21916202 ECH