Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g01261 ATGTATTCCAATAAAGGGTATAGAGATGATCGCAAAGCTGAGCCTCGTTACATTGAAACCGACCCAAATGGTAGATATGCTCGGGTTGGAGATATCTTAGGAAAGGGGGCAATGAAGACAGTGTATAAAGCAATTGATGAGGTTCTTGGAACAGAGGTTGCATGGAGTCAGGTCAAACTCAATGATGCATTTCGCAAACCAGAGGACTTGGAGAGGCTTTATTTAGAGGTTCATCTCCTCAGCACCCTCAAACACCAATCCATCATGAGATTCTACACCTCTTGGATTGATGTCAACAATAAGACCTTCAACTTCATTACAGAAATGTTTACTTCAGGGACTCTAAGAGAATACAGGAAGAAATATAAGCACATAGGTCTGAGAGCAATAAAGAATTGGGCTCGGCAAATCTTACAGGGTCTTGTTTATCTGCATGAACATGATCCTCCAGTAATTCATAGGGACCTCAAATGTGATAATATATTTGTCAATGGCCATCTTGGACAAGTGAAAATTGGTGACCTGGGTCTAGCAGCAATTCTCCATGGTTCCCAACCAGCTCACAGTGTTATAGGCACTCCCGAGTTCATGGCACCAGAATTGTATGAGGAAGAATACAATGAACTTGTTGATGTGTACTCATTTGGCATGTGTGTTTTGGAAATGCTTACATCTGATTATCCATACAGTGAATGTACTAACCCTGCACAGATATACAAAAAAGTGACATCAGGGAAGCTACCAGCAGCATTTTTCAGGATTGAAGACACAGAAGCACAAAAGTTTATTGGCAAATGTCTAATAGCTGCAGCAGAAAGACCATCGGCAAAAGAATTGTTGCATGATCCATTTCTTTTGTCTAATGATGAATCATCCATGGCAAAGATTGGAATTCCGAAGCCGTTTCTAAATTACAGCGAAATGGAAAAACTTCAACTGAGTGATGATTTACCTATGACTAAAATGTCAATAACTGGGAAGTTGAATCCAGAAGATGGCACTATCTTTCTCAAAGTGAAAATTTCTGAGAAGGATGGTTCTTGTAGGAATGTGTACTTTCCCTTTGACATTTACACAGACACCCCTGTTGATGTTGCAATAGAGATGGTGAAAGAGTTGGAAATCACAGATTTGAAGCCTTCTGATATTGCACGTATGATTGAAGGAGAGATATCTGTGCTGCTTCCGAATTGGAGGAATAGTAACTGTCCAGATACCTGCCATACATTCAGTTATAATGATGACAAGGACAATGAAGATCCTCATCGTCTTTTCCGCTCTATTTCTTCTTGTTCATCATCCCTAGAATCAACACTAGGCTCAGCCAGCAGAGTTGATGACTTATTGAATGGATATCATTGGCTCCATGGTGATGTAGTTGATGATGGAAGTTCAATATGCTCTTTGCATGGAACATGTTCCAACTCAAACTTGTGTTCAATGGATGAGGATGAGGAACATTATAAGAGTTCTACAAGAAAAGAGAAAGAGCTCATGATAAAGAGTCACATGTGTACTAGATTTTCCCCTAATGAAGACCACAAAATTGTGGCAGGACCACAAACAGCTTGTAGTGGCAAAAGTAACAGGATGATAGACAATCGCAGACTAACTAGGAACAAGTCATTAATTGATACCAGAAGCCAGCTACTGCATATATCATTGGTTGAAGAGATAAACAAAAGAAGATTCAAGACAGTTGGAGCTGTGGAAAATATTGGATTTGTGACTCCTTATCAGGTTACAAACAAATTTTCAAATCCAGCATCTGCTGCTTTCGATGTCAACTCTTCAAGTACAAAGGGAAAAAACTTGAGAGACAAAAAAATTTGA 1833 0.3944 MYSNKGYRDDRKAEPRYIETDPNGRYARVGDILGKGAMKTVYKAIDEVLGTEVAWSQVKLNDAFRKPEDLERLYLEVHLLSTLKHQSIMRFYTSWIDVNNKTFNFITEMFTSGTLREYRKKYKHIGLRAIKNWARQILQGLVYLHEHDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILHGSQPAHSVIGTPEFMAPELYEEEYNELVDVYSFGMCVLEMLTSDYPYSECTNPAQIYKKVTSGKLPAAFFRIEDTEAQKFIGKCLIAAAERPSAKELLHDPFLLSNDESSMAKIGIPKPFLNYSEMEKLQLSDDLPMTKMSITGKLNPEDGTIFLKVKISEKDGSCRNVYFPFDIYTDTPVDVAIEMVKELEITDLKPSDIARMIEGEISVLLPNWRNSNCPDTCHTFSYNDDKDNEDPHRLFRSISSCSSSLESTLGSASRVDDLLNGYHWLHGDVVDDGSSICSLHGTCSNSNLCSMDEDEEHYKSSTRKEKELMIKSHMCTRFSPNEDHKIVAGPQTACSGKSNRMIDNRRLTRNKSLIDTRSQLLHISLVEEINKRRFKTVGAVENIGFVTPYQVTNKFSNPASAAFDVNSSSTKGKNLRDKKI 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g01261 610 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 12 480 - -
Viun6g01261 610 FunFam Probable serine/threonine-protein kinase WNK1 11 108 - -
Viun6g01261 610 ProSitePatterns Serine/Threonine protein kinases active-site signature. 151 163 IPR008271 GO:0004672|GO:0006468
Viun6g01261 610 Gene3D Phosphorylase Kinase; domain 1 11 108 - -
Viun6g01261 610 SUPERFAMILY Protein kinase-like (PK-like) 29 318 IPR011009 -
Viun6g01261 610 Pfam Protein kinase domain 30 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun6g01261 610 FunFam probable serine/threonine-protein kinase WNK9 110 290 - -
Viun6g01261 610 MobiDBLite consensus disorder prediction 591 610 - -
Viun6g01261 610 Gene3D Transferase(Phosphotransferase) domain 1 110 292 - -
Viun6g01261 610 SMART serkin_6 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun6g01261 610 ProSiteProfiles Protein kinase domain profile. 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g01261 Viun-Chr6 21771872 21777205 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g01261 17 584 MAP Kinase Kinase Kinase AT5G58350 58.304 0.0 627
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Viun6g01261 Pkinase 2.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g01261 K08867 - gmx:100778102 978.008