Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g01259 ATGTATTCCAATAAAGGGTATAGAGATGATCGCAAAGCTGAGCCTCGTTACATTGAAACCGACCCAAATGGTAGATATGCTCGGGTTGGAGATATCTTAGGAAAGGGGGCAATGAAGACAGTGTATAAAGCAATTGATGAGGTTCTTGGAACAGAGGTTGCATGGAGTCAGGTCAAACTCAATGATGCATTTCGCAAACCAGAGGACTTGGAGAGGCTTTATTTAGAGGTTCATCTCCTCAGCACCCTCAAACACCAATCCATCATGAGATTCTACACCTCTTGGATTGATGTCAACAATAAGACCTTCAACTTCATTACAGAAATGTTTACTTCAGGGACTCTAAGAGAATACAGGAAGAAATATAAGCACATAGGTCTGAGAGCAATAAAGAATTGGGCTCGGCAAATCTTACAGGGTCTTGTTTATCTGCATGAACATGATCCTCCAGTAATTCATAGGGACCTCAAATGTGATAATATATTTGTCAATGGCCATCTTGGACAAGTGAAAATTGGTGACCTGGGTCTAGCAGCAATTCTCCATGGTTCCCAACCAGCTCACAGTGTTATAGGCACTCCCGAGTTCATGGCACCAGAATTGTATGAGGAAGAATACAATGAACTTGTTGATGTGTACTCATTTGGCATGTGTGTTTTGGAAATGCTTACATCTGATTATCCATACAGTGAATGTACTAACCCTGCACAGATATACAAAAAAGTGACATCAGTAAGTTCTGATCGTGGTTTAAGGTTTGAAAATGCCAGTAGAGATATGAAGGATTTTTATATATACGCAAATTTTCTGTCTTATGCTCAGGGGAAGCTACCAGCAGCATTTTTCAGGATTGAAGACACAGAAGCACAAAAGTTTATTGGCAAATGTCTAATAGCTGCAGCAGAAAGACCATCGGCAAAAGAATTGTTGCATGATCCATTTCTTTTGTCTAATGATGAATCATCCATGGCAAAGATTGGAATTCCGAAGCCGTTTCTAAATTACAGCGAAATGGAAAAACTTCAACTGAGTGATGATTTACCTATGACTAAAATGTCAATAACTGGGAAGTTGAATCCAGAAGATGGCACTATCTTTCTCAAAGTGAAAATTTCTGAGAAGGATGGTTCTTGTAGGAATGTGTACTTTCCCTTTGACATTTACACAGACACCCCTGTTGATGTTGCAATAGAGATGGTGAAAGAGTTGGAAATCACAGATTTGAAGCCTTCTGATATTGCACGTATGATTGAAGGAGAGATATCTGTGCTGCTTCCGAATTGGAGGAATAGTAACTGTCCAGATACCTGCCATACATTCAGTTATAATGATGACAAGGACAATGAAGATCCTCATCGTCTTTTCCGCTCTATTTCTTCTTGTTCATCATCCCTAGAATCAACACTAGGCTCAGCCAGCAGAGTTGATGACTTATTGAATGGATATCATTGGCTCCATGGTGATGTAGTTGATGATGGAAGTTCAATATGCTCTTTGCATGGAACATGTTCCAACTCAAACTTGTGTTCAATGGATGAGGATGAGGAACATTATAAGAGTTCTACAAGAAAAGAGAAAGAGCTCATGATAAAGAGTCACATGTGTACTAGATTTTCCCCTAATGAAGACCACAAAATTGTGGCAGGACCACAAACAGCTTGTAGTGGCAAAAGTAACAGGATGATAGACAATCGCAGACTAACTAGGAACAAGTCATTAATTGATACCAGAAGCCAGCTACTGCATATATCATTGGTTGAAGAGATAAACAAAAGAAGATTCAAGACAGTTGGAGCTGTGGAAAATATTGGATTTGTGACTCCTTATCAGGTTACAAACAAATTTTCAAATCCAGCATCTGCTGCTTTCGATGTCAACTCTTCAAGTACAAAGGGAAAAAACTTGAGAGACAAAAAAATTTGA 1923 0.3916 MYSNKGYRDDRKAEPRYIETDPNGRYARVGDILGKGAMKTVYKAIDEVLGTEVAWSQVKLNDAFRKPEDLERLYLEVHLLSTLKHQSIMRFYTSWIDVNNKTFNFITEMFTSGTLREYRKKYKHIGLRAIKNWARQILQGLVYLHEHDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILHGSQPAHSVIGTPEFMAPELYEEEYNELVDVYSFGMCVLEMLTSDYPYSECTNPAQIYKKVTSVSSDRGLRFENASRDMKDFYIYANFLSYAQGKLPAAFFRIEDTEAQKFIGKCLIAAAERPSAKELLHDPFLLSNDESSMAKIGIPKPFLNYSEMEKLQLSDDLPMTKMSITGKLNPEDGTIFLKVKISEKDGSCRNVYFPFDIYTDTPVDVAIEMVKELEITDLKPSDIARMIEGEISVLLPNWRNSNCPDTCHTFSYNDDKDNEDPHRLFRSISSCSSSLESTLGSASRVDDLLNGYHWLHGDVVDDGSSICSLHGTCSNSNLCSMDEDEEHYKSSTRKEKELMIKSHMCTRFSPNEDHKIVAGPQTACSGKSNRMIDNRRLTRNKSLIDTRSQLLHISLVEEINKRRFKTVGAVENIGFVTPYQVTNKFSNPASAAFDVNSSSTKGKNLRDKKI 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g01259 640 ProSitePatterns Serine/Threonine protein kinases active-site signature. 151 163 IPR008271 GO:0004672|GO:0006468
Viun6g01259 640 Gene3D Transferase(Phosphotransferase) domain 1 111 343 - -
Viun6g01259 640 Pfam Protein kinase domain 30 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun6g01259 640 SMART serkin_6 27 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun6g01259 640 SUPERFAMILY Protein kinase-like (PK-like) 22 340 IPR011009 -
Viun6g01259 640 ProSiteProfiles Protein kinase domain profile. 27 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun6g01259 640 Gene3D Phosphorylase Kinase; domain 1 11 108 - -
Viun6g01259 640 FunFam WNK protein kinase 110 266 - -
Viun6g01259 640 FunFam Probable serine/threonine-protein kinase WNK1 11 108 - -
Viun6g01259 640 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 12 510 - -
Viun6g01259 640 MobiDBLite consensus disorder prediction 621 640 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g01259 Viun-Chr6 21771869 21777208 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g01259 17 614 MAP Kinase Kinase Kinase AT5G58350 55.428 0.0 611
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Viun6g01259 Pkinase 1.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g01259 K08867 - gmx:100778102 962.214