Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g01258 ATGGGTAATAACAGGTTCAGATTGTCTGATATGATGCCAAATGCATGGTTCTATAAGCTCAAAGATATGAGCAAATCAAGGAAGAAAAATGGCACTCATGTTATGAAGAACAAAGTTACCTCACCAACAACCTCCCAAAGGTCACAACAACCAAGATACTCTCATTGTTTCTCCATTGAACCAAACATAGCTGGTAAGTTATACAACTCTCCTATTTACACTAAGCACTCAGACAACATATTCATTGATTCACCAAGAAGATCATCTAAAAGAAGAACCAAGAGAAAAACCATTTACAAGCCTTCTCCCACAGTTGTCTCTTCACCAGTCATAGAAAGTTTTAGTTTTAGTTCTCGTTCCACAAATTGGATTAAGCCAAATCCACCTCAGTCTTCTTCTGACTACTATCTCTCCTCCTCTGATACTTCTTATGAATCAAACTTCCATGAATATGTTTCATCTGAGTCTGAGTGTGACAAGTTCACTATTCCTGACCTGCTTAATGGAGTAGCCTCTGAATGCAGTTGCAGAGTCAGCTCTTCCACCAATGACATCATCATTGACATGAAAAATGAACCATTCACTGCAAATTCTGAAAACCTTGATGGGTTTGACACAATTTCACAATTAGGCCTTCCTCCGATATTGACAAAGCCAGTGAAGTTTGATGATAAGGTCATTGAAGCCATTGAGCTGAGAAGATCAGCTAAATTTGATGAGGTAAATTCTCATCAATCTCAAGCTGTTAAAGTTAGCAAAGAGGAAAGCAGTAGAAGTAAGAGAGACAGAAAAACCAGTCCAGTATCTAGAATTTCCTCTGCTAGTTCTACTGGTATAAGACTTAGAGTCAATTCTCCAAAACTGGCAAGCAAGAAAGTTCAAGCCTATGCAAGAAGGAGTGTTTCATCCAAAGCAGGTAAGACCTCAGTGGATACAGGATTTCCAGAGGGATTTGCAGTTGTTAAGTCCTCACTTGATCCACAAAGAGACTTCAGGGAATCGATGGTGGAGATGATAGTGGAGAACAATATCCGAGCATCAAAAGATTTGGAGAACTTGCTTGCATGCTATCTTTCACTGAATTCAAGGGAATACCATGATCTCATTGTCAAAGCATTTGAGCAAATTTGGTATGACATGGCTCTACTTGGAATGTAA 1158 0.3903 MGNNRFRLSDMMPNAWFYKLKDMSKSRKKNGTHVMKNKVTSPTTSQRSQQPRYSHCFSIEPNIAGKLYNSPIYTKHSDNIFIDSPRRSSKRRTKRKTIYKPSPTVVSSPVIESFSFSSRSTNWIKPNPPQSSSDYYLSSSDTSYESNFHEYVSSESECDKFTIPDLLNGVASECSCRVSSSTNDIIIDMKNEPFTANSENLDGFDTISQLGLPPILTKPVKFDDKVIEAIELRRSAKFDEVNSHQSQAVKVSKEESSRSKRDRKTSPVSRISSASSTGIRLRVNSPKLASKKVQAYARRSVSSKAGKTSVDTGFPEGFAVVKSSLDPQRDFRESMVEMIVENNIRASKDLENLLACYLSLNSREYHDLIVKAFEQIWYDMALLGM 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g01258 385 MobiDBLite consensus disorder prediction 243 277 - -
Viun6g01258 385 Pfam DNA-binding domain 1 48 IPR025830 GO:0003677
Viun6g01258 385 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 119 380 IPR038933 GO:0045892
Viun6g01258 385 MobiDBLite consensus disorder prediction 27 52 - -
Viun6g01258 385 ProSiteProfiles OVATE domain profile. 320 379 IPR006458 -
Viun6g01258 385 NCBIfam uncharacterized plant-specific domain TIGR01568 318 380 IPR006458 -
Viun6g01258 385 MobiDBLite consensus disorder prediction 251 267 - -
Viun6g01258 385 MobiDBLite consensus disorder prediction 35 52 - -
Viun6g01258 385 Pfam Transcriptional repressor, ovate 324 380 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g01258 Viun-Chr6 21767054 21768567 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Viun6g01258 Ovate 4.2e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g01258 - - gmx:100798120 586.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun6g01258 6 21767054 21768567 Viun6g01258 6 21767054 21768567 ECH
Viun6g01258 6 21767054 21768567 Viun8g02000 8 30550589 30552048 PCT