Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g01256 ATGCCGGAGATCGAGCAGGTGGCGATGGAGGACACTGCCTTGTTCGGAAAGTACGAGCTCGGGCGCGTTATCGGGTGCGGCGCCTTCGCGAAGGTGCATTACGCGCGCAACGTGCAGACGGGGCAGAGCGTGGCCGTGAAAATCATCAACAAGAAGAAGCTAAACGGAACAGGCCTCGCCGGAAACGTGAAACGTGAAATCACGATCATGAGCAAGCTCCACCACCCCAACATCGTGCGTCTCCACGAGGTTCTCGCCACCAAAAACAAAATCTTCTTCATCATGGACTTCATCCGCGGCGGAGAGCTCTTCGGGAAGATCTCGAAGGGTCGTTTCTCGGAGGATCTCAGCCGGAAGTACTTCCACCAGCTCATCTCCGCCGTCGGCTACTGCCACTCGCGCGGCGTCTTCCACCGCGACCTCAAGCCGGAGAACCTCCTCCTCGACGAGAACGGCGATTTACGGGTCACCGATTTCGGGTTGAGTGCCGTCAGGGACCAGATCCGACCCGACGGGTTGCTCCACACGCTTTGCGGAACCCCTGCCTACGTGGCACCCGAGATTTTAAGCAAAAAAGGTTATGATGGTGCCAAGATTGATATTTGGTCATGCGGTGTCGTTTTGTTCGTTCTCTCCGCGGGTTACTTACCGTTTAACGATCCAAACTTGATGGTAATGTATAAGAAGATTTACAAAGGAGAGTTCCGGTGCCCGCGATGGATGTCGCCGGAGCTCCGGCGCTTTTTGTCGAAGCTGCTAGATACCAACCCGGAAACGAGGATCACGGTGGACGGCATGCTCCGTGACCCATGGTTCAAAAAAGGGTACAAAGAGGTCAAATTTCACGAGGAGGATTTCATGTCCGGGTCGGGTATCGGGTACGGGCCGAAAGACGAGCGGATAATGAATTTGAACGCTTTTGACATAATAAGTTTCTCTGCGGGTTTGGATTTGTCGGGGCTGTTCGGGGAGTCCGTGGAGGGGGACCGGTTGGTGACGCGGGAGTCGCCGGAGAAGGTTCTGGAGATGGCGGAGGAGGTGGGGGCGGCAGCGGATATGGCGGTGCGGTGGAAGAAGGAGTGCGGGGTGGAGTTAGAAGATTTCAATGGAAGGTTCGGGTTTGAGGTGGAGGTTTACCGGCTCACGGCGGAGCTAACGGTTGTTGAAGCCTGGAAAAGGTGCGGCGACGGCGTGACTTTTAAAAGCGTGTGGGAGGAAAAGTTGAAGCCTTTGTTGGTCGGAGGTGCGACGACGTCTCATAACAGCGAAGAGGAACAACCACTACAACAACCTGAGTCGCAGCCGGTTGCCGGTGACTGA 1320 0.5583 MPEIEQVAMEDTALFGKYELGRVIGCGAFAKVHYARNVQTGQSVAVKIINKKKLNGTGLAGNVKREITIMSKLHHPNIVRLHEVLATKNKIFFIMDFIRGGELFGKISKGRFSEDLSRKYFHQLISAVGYCHSRGVFHRDLKPENLLLDENGDLRVTDFGLSAVRDQIRPDGLLHTLCGTPAYVAPEILSKKGYDGAKIDIWSCGVVLFVLSAGYLPFNDPNLMVMYKKIYKGEFRCPRWMSPELRRFLSKLLDTNPETRITVDGMLRDPWFKKGYKEVKFHEEDFMSGSGIGYGPKDERIMNLNAFDIISFSAGLDLSGLFGESVEGDRLVTRESPEKVLEMAEEVGAAADMAVRWKKECGVELEDFNGRFGFEVEVYRLTAELTVVEAWKRCGDGVTFKSVWEEKLKPLLVGGATTSHNSEEEQPLQQPESQPVAGD 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g01256 439 Gene3D Transferase(Phosphotransferase) domain 1 8 294 - -
Viun6g01256 439 Gene3D Kinase associated domain 1, KA1 300 414 - -
Viun6g01256 439 FunFam Non-specific serine/threonine protein kinase 9 97 - -
Viun6g01256 439 SMART serkin_6 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun6g01256 439 FunFam Non-specific serine/threonine protein kinase 8 297 - -
Viun6g01256 439 SUPERFAMILY Protein kinase-like (PK-like) 15 282 IPR011009 -
Viun6g01256 439 CDD CIPK_C 305 412 - -
Viun6g01256 439 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 10 392 - -
Viun6g01256 439 MobiDBLite consensus disorder prediction 414 439 - -
Viun6g01256 439 ProSiteProfiles Protein kinase domain profile. 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun6g01256 439 Pfam Protein kinase domain 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun6g01256 439 ProSitePatterns Protein kinases ATP-binding region signature. 24 47 IPR017441 GO:0005524
Viun6g01256 439 ProSiteProfiles NAF domain profile. 299 323 IPR018451 GO:0007165
Viun6g01256 439 MobiDBLite consensus disorder prediction 415 433 - -
Viun6g01256 439 ProSitePatterns Serine/Threonine protein kinases active-site signature. 136 148 IPR008271 GO:0004672|GO:0006468
Viun6g01256 439 Pfam NAF domain 303 356 IPR004041 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g01256 Viun-Chr6 21742819 21745345 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g01256 1 422 CBL-interacting serine-threonine protein kinases AT2G30360 62.187 0.0 535
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Viun6g01256 Pkinase 7.1e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g01256 - - gsj:114377188 739.954