Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g01251 ATGGAGAGTAAACCAAACATCTTAATGCAAAGATATGAGTTAGGAAGATTACTCGGTCAGGGAACCTTTGGAAAGGTTTACTATGGTAGAAGTGCAATAACTAACCAGGGTGTGGCTATTAAAATGATTGACAAAGATAAGATTATGAGAACGGGGCAAGTTGAACAAATCAGGCGTGAAATATCTGTTATGAGATTGGCTAGGCACCCCAATATTATTCAGCTGTTTGAGGTTATGGCTAACAAGAGTAAGATTTACTTTGTTATGGAGTATGCTAAAGGTGGTGAGCTCTTCAACAAGGTGGCCAGAGGAAAACTGAAGGAAGATGTAGCACACAAGTATTTTAAGCAGCTAATTAATGCAGTGGATTATTGTCACAGTAGAGGTGTGTTCCACAGAGACATAAAGCCCGAGAACATTCTATTGGATGAAAATGGGAATCTAAAGGTATCTGATTTTGGATTGAGTGCTCTTGTTGAATCCAAGAGGCAGGATGGTTTGCTCCATACTCCTTGTGGCACACCTGCTTATGTTGCTCCTGAAGTCATCAAAAGGAAGGGATATGATGGCACAAAAGCTGATATATGGTCTTGTGGGATAGTTCTGTTTGTCTTGTTAGCAGGTTATCTCCCTTTTCATGACCCAAATTTGATAGAGATGTATAGGAAGATAAGCAAAGCAGAATTAAAATGCCCTAATTGGTTCCCACCTGAAGTATGCAAGCTATTGGGAATGATGTTGGATCCAAATCCTGATACTAGGATTCCCATATCTACCATTAGGGAACATTGTTGGTTTAAGAAAGAACCTAATGTTAAAAACAAAAGACCTGTAGTGGAAAACAATATTGTTTCTTCTTCAGGTACTGTTGATCTTGATCAAGATGATTGTTGTGATGGTTTAGCAGCAGAAGCAAACGGAGATTCAGTTGCTCCCTTAAGTATAAATGCCTTTGATATTATCTCCCGTTCTGTGGGTTTTGATCTTTCTAGATTCTTTGATGAGAGTTTCCGGAAAAAGGAAGCAAGATTTAGTTCAAGGTTACCTGCAAGTGTCATCATCTCGAAGCTGGAAGACATTGCTAAGCAACTGAGGATGAAAATAAAGAAAAAGGCTGCGGGTTTGTTGAAATTAGAGGGCTTGGAGGAAGGTAGGAAGGGGGTTTTAACCATTGATGCAGAGATCTTTGAAGTTACACCTTGTTTCCATTTGGTGGAGGTGAAAAAATCAAATGGAGACACATTGGAGTATCAGAAAATATTGAAAGAGGATATCAGGCCTGCTCTTCAGGACATTGTTTGGGTCTGGCAAAGTGACCAACAACTGCAATCACAACCGTCAGAGGAAGAACTGCAGAACACAGATGATCAGCAGCAACAACAACCACAATCATAA 1395 0.3978 MESKPNILMQRYELGRLLGQGTFGKVYYGRSAITNQGVAIKMIDKDKIMRTGQVEQIRREISVMRLARHPNIIQLFEVMANKSKIYFVMEYAKGGELFNKVARGKLKEDVAHKYFKQLINAVDYCHSRGVFHRDIKPENILLDENGNLKVSDFGLSALVESKRQDGLLHTPCGTPAYVAPEVIKRKGYDGTKADIWSCGIVLFVLLAGYLPFHDPNLIEMYRKISKAELKCPNWFPPEVCKLLGMMLDPNPDTRIPISTIREHCWFKKEPNVKNKRPVVENNIVSSSGTVDLDQDDCCDGLAAEANGDSVAPLSINAFDIISRSVGFDLSRFFDESFRKKEARFSSRLPASVIISKLEDIAKQLRMKIKKKAAGLLKLEGLEEGRKGVLTIDAEIFEVTPCFHLVEVKKSNGDTLEYQKILKEDIRPALQDIVWVWQSDQQLQSQPSEEELQNTDDQQQQQPQS 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g01251 464 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun6g01251 464 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun6g01251 464 ProSiteProfiles NAF domain profile. 310 334 IPR018451 GO:0007165
Viun6g01251 464 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Viun6g01251 464 FunFam Non-specific serine/threonine protein kinase 3 91 - -
Viun6g01251 464 Gene3D Kinase associated domain 1, KA1 310 435 - -
Viun6g01251 464 FunFam Non-specific serine/threonine protein kinase 92 273 - -
Viun6g01251 464 CDD CIPK_C 316 430 - -
Viun6g01251 464 SUPERFAMILY Protein kinase-like (PK-like) 8 267 IPR011009 -
Viun6g01251 464 Pfam NAF domain 312 370 IPR004041 GO:0007165
Viun6g01251 464 Gene3D Transferase(Phosphotransferase) domain 1 3 307 - -
Viun6g01251 464 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Viun6g01251 464 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun6g01251 464 FunFam Non-specific serine/threonine protein kinase 310 434 - -
Viun6g01251 464 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 6 429 - -
Viun6g01251 464 MobiDBLite consensus disorder prediction 444 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g01251 Viun-Chr6 21721095 21723809 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g01251 1 440 CBL-interacting serine-threonine protein kinases AT5G58380 66.372 0.0 625
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Viun6g01251 Pkinase 4.2e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g01251 - K07198 gmx:100790905 783.482