Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g01245 ATGATCCAAAAGGATATGGCTTCTCATCTCCAACACTTGGTTGTTATTGTCATGGCCACACTTCTCACAATCCCTTCGCATGCACAACAACTCACTCCTGATTTTTACTACAAGGTTTGCCCTCAGGCACTTCCAGTCATTAAGTCAGTTGTTCAAAGAGCCATATTCCGTGAACGCCGAATGGGAGCATCTTTACTGCGTTTGCACTTTCATGACTGCTTTGTCAATGGCTGTGATGGATCAGTTCTGCTGGATGACACCCCAAATTTCACAGGGGAGAAGACTGCACTCCCAAATATTGGCTCAATCAGAGGTTTGGAGGTGATTGATGAAATCAAAGCAGCTGTTGACAAAGCTTGCAAACGTCCTGTGGTATCATGTGCAGATATCTTAGCAATTGCTGCTCGTGATTCCATTTCTATTTTGGGAGGTTCAGTGTATTGGTACAAAGTGGCATTAGGAAGAAGGGACGCAAGAACTGCAAGCAAGGATGCTGCAAACTCAAATCTTCCTCCGCCATTTTTCAGCCTCTCTCAGCTTCTTTCAAATTTCCAATCTCATGGACTTGACCTTAAAGATCTCGTAGCTCTTTCTGGTGCACACACCATTGGATTTGCACAATGTTCCACCTTTAGGAACAGGATCTACAATGACACCAACATAGACCCCAGCTTTGCATCTTCCTTGCAGAGCACGTGCCCTAAAAGTGGTGGCGATGGCAATCTTGCACCGTTGGATCGTGTCACTCCCGCAAGAGTTGACACTTCATACTATACTTCTTTGCTAACTAAAATGGGTCTTCTTCATTCTGATCAAGAGCTCTTCAATGGAGATGGCAGTGAAAGTGACTCTTTGGTGAAGCTCTATAGCAGAAACCCTTTTGCTTTTGCAAGAGATTTCAAAGCTTCCATGATCAAGATGGGTAACATCAAGCCTCTTACTGGGAATGCTGGAGAGATCAGAGTCAACTGTAGAATAGTCAACTAA 987 0.4417 MIQKDMASHLQHLVVIVMATLLTIPSHAQQLTPDFYYKVCPQALPVIKSVVQRAIFRERRMGASLLRLHFHDCFVNGCDGSVLLDDTPNFTGEKTALPNIGSIRGLEVIDEIKAAVDKACKRPVVSCADILAIAARDSISILGGSVYWYKVALGRRDARTASKDAANSNLPPPFFSLSQLLSNFQSHGLDLKDLVALSGAHTIGFAQCSTFRNRIYNDTNIDPSFASSLQSTCPKSGGDGNLAPLDRVTPARVDTSYYTSLLTKMGLLHSDQELFNGDGSESDSLVKLYSRNPFAFARDFKASMIKMGNIKPLTGNAGEIRVNCRIVN 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g01245 328 PRINTS Plant peroxidase signature 64 84 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun6g01245 328 PRINTS Plant peroxidase signature 40 59 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun6g01245 328 PRINTS Plant peroxidase signature 302 315 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun6g01245 328 PRINTS Plant peroxidase signature 124 134 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun6g01245 328 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun6g01245 328 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun6g01245 328 PRINTS Plant peroxidase signature 192 204 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun6g01245 328 PRINTS Plant peroxidase signature 104 117 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun6g01245 328 PRINTS Haem peroxidase superfamily signature 193 208 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun6g01245 328 PRINTS Haem peroxidase superfamily signature 62 76 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun6g01245 328 PRINTS Haem peroxidase superfamily signature 145 157 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun6g01245 328 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun6g01245 328 PRINTS Haem peroxidase superfamily signature 125 142 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun6g01245 328 SUPERFAMILY Heme-dependent peroxidases 30 328 IPR010255 GO:0004601|GO:0006979|GO:0020037
Viun6g01245 328 ProSitePatterns Peroxidases active site signature. 62 73 IPR019794 GO:0004601
Viun6g01245 328 FunFam Peroxidase 171 307 - -
Viun6g01245 328 ProSiteProfiles Plant heme peroxidase family profile. 30 328 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun6g01245 328 FunFam Peroxidase 34 177 - -
Viun6g01245 328 Pfam Peroxidase 48 291 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun6g01245 328 Gene3D Peroxidase, domain 2 171 307 - -
Viun6g01245 328 ProSitePatterns Peroxidases proximal heme-ligand signature. 193 203 IPR019793 -
Viun6g01245 328 CDD secretory_peroxidase 30 327 IPR033905 GO:0004601|GO:0042744
Viun6g01245 328 Gene3D - 34 325 - -
Viun6g01245 328 PANTHER PEROXIDASE 72-RELATED 28 326 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g01245 Viun-Chr6 21664828 21666475 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g01245 30 328 Peroxidase AT5G05340 60.133 4.67e-125 359
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g01245 K00430 - gmx:100816580 559.681