Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g01242 ATGGTTTCAAGGATTCACAAGAGAACAGCCATGTACAGGAACCTACAGCTGCTTCGTTCAATTAGATACTCTTACTCGCCACCAAAAGCCTCAGTGTTATTGGATGTGTCAAATTGCATACAAGGTTTAAAGCAAAAGCTGCAAGAATTGAACGAGTTAAAAGTTGCAACGGCACGAAAAATCGCTGACTATGATCCAATGCCTAAGCTTGAAGTTAAAATGCAAGAAGAGGGTTTTGTGATAAAGGTGCTTAGTCAAAGGAGTTGCCAGGGGTTGCTGGTGTTTATATTGGAAGCCTTTGAAGAGTTGGGTCTTGATGTGCTCCAGGCTAGGGTTTCTTGTGCTGACAGCTTCACTTTAGAGGCTTTAGGAAACAAAGAGAAGAATGAAGATAGTCGTGCTTTGGATGCACAACTAGTTGAAGAAGTAGTGTCTAAAGCTATTCAAAACTGGAGAGAAGTTTCAGAGATATAA 474 0.4093 MVSRIHKRTAMYRNLQLLRSIRYSYSPPKASVLLDVSNCIQGLKQKLQELNELKVATARKIADYDPMPKLEVKMQEEGFVIKVLSQRSCQGLLVFILEAFEELGLDVLQARVSCADSFTLEALGNKEKNEDSRALDAQLVEEVVSKAIQNWREVSEI 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g01242 157 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 3 142 - -
Viun6g01242 157 Coils Coil 33 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g01242 Viun-Chr6 21647873 21649704 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g01242 - - gmx:100305696 232.261
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun6g01242 6 21647873 21649704 Viun6g01242 6 21647873 21649704 ECH
Viun6g01242 6 21647873 21649704 Viun1g03281 1 40460431 40461883 ECH
Viun6g01242 6 21647873 21649704 Viun8g02408 8 33858429 33860124 ECH
Viun6g01242 6 21647873 21649704 Viun5g01210 5 8624370 8625996 ECH
Viun5g01210 5 8624370 8625996 Viun6g01242 6 21647873 21649704 ECH
Viun6g01242 6 21647873 21649704 Viun8g01972 8 30284599 30285904 PCT