Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g01241 ATGGCTACTGAGAAGACACCATTCGAACTTGCCATGAAAGAAGTTGTTCTTATCAAACCATCAAAACCAACACCATTCTCTGTTCTTCATTTATCTTCACTAGACCACATACCTGATCTTAATATCCTATGCCATACCCTCCATGTGTATCGATCAAAAGTTGATGATCATGATGAACCTAGTTGCCCTAATCACCAACTACTACACCCTGCTGATGTGATCAAAGCAGCACTTTCAAAGGCTTTAGTCTATTACTATCCTCTTGCAGGTAGGCTAGTAGACCACACTGATGGAAAGCTCGTAATCAACTGCAATGCAAAAGGTGTTCCGTTCTTGGAAGCCAATGCTACTTGCAAGCTTTCTTCTCTCCGTTACTGGGATGGCACTGACATGGAAACTGCAAAAAACTTAGTGTATGACCTTCCTTCTCAAGATGAAAGTGGCCACCAATATCCCTTGGTGTTCAAGGTCACAAGCTTTCCTTGTGGGGGGTTCACCATTGGAATGGGGCTGTTACATTCTGTTTGTGATGGCGTTGGAGCATTTCAGTTCTTCAAAGCCATCATGGAGTTTGCAAGGGGAAAAACTGAGCCCTCTGTGAAGCCTGTGTGGGAGAGAGATAGGCTAACGGGATCAATCACTAAAAACCCTTTGCAAATTGATTTTTTGGACGAGGCCTCAGCTGCAGTTTCACCCTTTCTTCCAACCAAAGTTCTCATGCACCAGTGCATTAAGGTGGACAGTGAGAGCATCAGAAGACTGAAGATGAGCTTGATGAAGGAATCAGGTGAGAACGAAAACTTCACTACTTTTGAATCACTTGCTGCATATGTGTGGAGGTCTAAATGTAGGGCCTTAAAAATGAGCTATGATGGGAAAGTTAAGCTGAATATCACAGTTGGAGTGAGAAGACACTTGCAAGATCCTTTGCCAGAAGGGTATTATGGAAATGTTGTTGTGGATGCTGACGTTGTTTTAACAATGAGGGAACTCAATGAAAGGCCCCTCTATGAGATTGTGAAGCTCATTAAAGAAATCAAGAAAGTTTCTTGTAACAGTGATTATGTCAGAAACTTCATGGACACTTTAGAGACAGATTTAGAGATAGATACGGAATTCAACATTGAAGGGAGTGGTGCATTCACTACCTTTACTGATTGGAGGCACTTGGACTTTGAAAATGTAGATTTTGGAGTTAAAGAAATTGTGAATGTTTTACCAATGCCTTCTGACATGTTTGGATGTGTTGATTTATGCATTTTCTCAGCTCTTGGGAACTTTGATTCTTCAATGGAGGGAGGGATTGGTATTTTTGTGTCCCTACCAGCTCCTGCATTGCTCACGTTCAAGGACGAGATGGAGGCTCTCAGCCTTTTCATTTGA 1383 0.4208 MATEKTPFELAMKEVVLIKPSKPTPFSVLHLSSLDHIPDLNILCHTLHVYRSKVDDHDEPSCPNHQLLHPADVIKAALSKALVYYYPLAGRLVDHTDGKLVINCNAKGVPFLEANATCKLSSLRYWDGTDMETAKNLVYDLPSQDESGHQYPLVFKVTSFPCGGFTIGMGLLHSVCDGVGAFQFFKAIMEFARGKTEPSVKPVWERDRLTGSITKNPLQIDFLDEASAAVSPFLPTKVLMHQCIKVDSESIRRLKMSLMKESGENENFTTFESLAAYVWRSKCRALKMSYDGKVKLNITVGVRRHLQDPLPEGYYGNVVVDADVVLTMRELNERPLYEIVKLIKEIKKVSCNSDYVRNFMDTLETDLEIDTEFNIEGSGAFTTFTDWRHLDFENVDFGVKEIVNVLPMPSDMFGCVDLCIFSALGNFDSSMEGGIGIFVSLPAPALLTFKDEMEALSLFI 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g01241 460 Gene3D - 6 223 IPR023213 -
Viun6g01241 460 PANTHER ACYL TRANSFERASE 4 8 454 - -
Viun6g01241 460 Gene3D - 233 453 IPR023213 -
Viun6g01241 460 Pfam Transferase family 13 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g01241 Viun-Chr6 21599323 21600768 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g01241 9 398 Monolignol Biosynthesis Gene Families AT5G48930 29.064 8.93e-39 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g01241 K20240 - gmx:100801843 493.041