Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g01239 ATGGCTACTGAAAAGACAGCATTCGAACTTGCCATGAAAGAAGTTGTTCTTATCAAACCATCAAAACCAACACCTTCCTCTATTCTTCCTTTATCTACACTAGACCACACACCTTCTTTTAATACCCTATGCCATACCCTCCATGTGTATCGATCAAAAGTTGATGATCATGATGAACCTAGTTGCCCTAATCACCAACTGCTACACCCTGCTGATGTGATCAAAGCAGCACTTTCAAAGGCTTTATTCTATTACTATCCTCTTGCAGGTAGGCTAGTAGACCACACTGATGGAAAGCTCGTAATCAACTGCAATGCAAAAGGTGTTCCGTTCTTGGAAGCCAATGCTACTTGCAAGCTTTCTTCTCTCCATTACTGGGATGGCACTGACATGGAAAGTGCAAAAAACTTAGTGTATGACCTTCCTTCTGAAGATGAAAGTGGCCACCAATATCCCTTGGTGTTCAAGGTCACAAACTTTCCTTGTGGGGGGTTCACCGTTGGAATGGGGCTGTTACATTCTGTTTGTGATGGCGTTGGAGCATGTCAGTTCTTCAAAGCCATCATGGAGTTTGCAAGGGGAAAAACTGAACCCTCTGTGAAGCCTGTGTGGGAGAGAGATAGGCTAAAGGGATCAATCACTAAAAACCCATTGCAAATTGATTTTTTGGACGATGCCTCAGCTGCAGTTTCACCCTTTCTTCCAACAGAAGTTCTCATGCATCAGTGCATTAAGGTGGACAGTGAGAGTATCAAAAGACTGAAGATGAGTTTGATGAAGGAATCAGGTGAGAACGAAAACTTCACTACTTTTGAATCACTAGCTGCATATGTGTGGAGGTCTAAATCTAGGGCTTTAAAATTGAACTACGATGGGAAAGTTAAGCTGAATATCACAGTTGGAGTGAGAAGACACTTGCAAGATCCTTTGCCAGAAGGGTATTATGGAAATGTTGTTGTGGATGCTGACGTTATTTTAACAATGAGGGAACTCAATGAAAGACCACTCCATGAGATTGTGAAGCTCATTAAAGAAAGCAAGAAAGTTTCTAGTAACAGTGATTATGTCAGAAACTTCATGAACACTTTAGAGACTGAACTAAATAATTTCAAGGCTGAAGCCAGTGGTGCATTCACTGCCTTGACTGATTGGAGGCACTTGAAGTTCTTTGAAAATGTAAATTTTGGAGTTAAAGAAATTTCGAATGTTGTACCAATGCCTTCTGACATGTTTGGATGTGTTGATTTATGCATTTTCTCAGCTCTTGGGAACTTTGATTCTTCAATGGAGGGAGGGGTTGGTATTTTTGTGTCTCTACCAGCTCCTGCATTGCTCACGTTCAAGGAGGAGATGGATGCTCTCACCCTTTTGATTTGA 1377 0.4147 MATEKTAFELAMKEVVLIKPSKPTPSSILPLSTLDHTPSFNTLCHTLHVYRSKVDDHDEPSCPNHQLLHPADVIKAALSKALFYYYPLAGRLVDHTDGKLVINCNAKGVPFLEANATCKLSSLHYWDGTDMESAKNLVYDLPSEDESGHQYPLVFKVTNFPCGGFTVGMGLLHSVCDGVGACQFFKAIMEFARGKTEPSVKPVWERDRLKGSITKNPLQIDFLDDASAAVSPFLPTEVLMHQCIKVDSESIKRLKMSLMKESGENENFTTFESLAAYVWRSKSRALKLNYDGKVKLNITVGVRRHLQDPLPEGYYGNVVVDADVILTMRELNERPLHEIVKLIKESKKVSSNSDYVRNFMNTLETELNNFKAEASGAFTALTDWRHLKFFENVNFGVKEISNVVPMPSDMFGCVDLCIFSALGNFDSSMEGGVGIFVSLPAPALLTFKEEMDALTLLI 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g01239 458 Pfam Transferase family 13 453 - -
Viun6g01239 458 Gene3D - 236 451 IPR023213 -
Viun6g01239 458 PANTHER ACYL TRANSFERASE 4 8 452 - -
Viun6g01239 458 Gene3D - 5 222 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g01239 Viun-Chr6 21548649 21550249 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g01239 9 396 Monolignol Biosynthesis Gene Families AT5G48930 28.747 3.16e-36 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g01239 K20240 - gmx:100801843 507.679