Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g01238 ATGGCTACTGAAAAGACAGCATTCGAACTTGCCATGAAAGAAGTTGTTCTTATCAAACCATCAAAACCAACACCTTCCTCTATTCTTCCTTTATCTACACTAGACCACACACCTTCTTTTAATACCCTATGCCATACCCTCCATGTGTATCGATCAAAAGTTGATGATCATGATGAACCTAGTTGCCCTAATCACCAACTGCTACACCCTGCTGATGTGATCAAAGCAGCACTTTCAAAGGCTTTATTCTATTACTATCCTCTTGCAGGTAGGCTAGTAGACCACACTGATGGAAAGCTCGTAATCAACTGCAATGCAAAAGGTGTTCCGTTCTTGGAAGCCAATGCTACTTGCAAGCTTTCTTCTCTCCATTACTGGGATGGCACTGACATGGAAAGTGCAAAAAACTTAGTGTATGACCTTCCTTCTGAAGATGAAAGTGGCCACCAATATCCCTTGGTGTTCAAGGTCACAAACTTTCCTTGTGGGGGGTTCACCGTTGGAATGGGGCTGTTACATTCTGTTTGTGATGGCGTTGGAGCATGTCAGTTCTTCAAAGCCATCATGGAGTTTGCAAGGGGAAAAACTGAACCCTCTGTGAAGCCTGTGTGGGAGAGAGATAGGCTAAAGGGATCAATCACTAAAAACCCATTGCAAATTGATTTTTTGGACGATGCCTCAGCTGCAGTTTCACCCTTTCTTCCAACAGAAGTTCTCATGCACCAGTGCATTAAGGTGGACAGTGAGAGCATCAGAAGACTGAAGATGAGCTTGGTGAAGGAATCAGGTGAGAACGAAAACATTACTACTTTTGAATCACTTGCTGCATATGTGTGGAGGTCTAAATGTAGGGCCTTAAAAATGAGCTATGATGGGAAAGTTAAGCTGAATATCACAGTAGGAGTGAGAAGACACTTGCAAGATCCTTTGCCAGAAGGGTATTATGGAAATGTTGTTGTGGATGCTGACGTTATTTTAACAATGAGGGAACTCAATGAAAGGCCCCTCTATGAGATTGTGAAGCTCATTAAAGAAAGCAAGAAAGTTTCTTGTAACAGTGATTATGTCAGAAACTTCATGGACACTTTAGAGACAGATTTAGAGATAGAAACGGAATTCAACATTGAAGGGAGTGGTGCATTCACTACCTTTACTGATTGGAGGCACTTGGAGTTCTATGAAAATGTAGATTTTGGAGTTAAAGAAATTGTGAATGTTGTACCAATCCCTTCTGACATGTTTGGATGTGTTGATTTATGCATTTTCTCAGCTCTTGGGAACTTTGATTCTTCAATGGAGGGAGGGGTTGGTATTTTTGTGTCCCTACCAGCTCCTGCATTGCTCACGTTCAAGGAGGAGATGGAGGCTCTCACCCTTTTGATTTGA 1386 0.4206 MATEKTAFELAMKEVVLIKPSKPTPSSILPLSTLDHTPSFNTLCHTLHVYRSKVDDHDEPSCPNHQLLHPADVIKAALSKALFYYYPLAGRLVDHTDGKLVINCNAKGVPFLEANATCKLSSLHYWDGTDMESAKNLVYDLPSEDESGHQYPLVFKVTNFPCGGFTVGMGLLHSVCDGVGACQFFKAIMEFARGKTEPSVKPVWERDRLKGSITKNPLQIDFLDDASAAVSPFLPTEVLMHQCIKVDSESIRRLKMSLVKESGENENITTFESLAAYVWRSKCRALKMSYDGKVKLNITVGVRRHLQDPLPEGYYGNVVVDADVILTMRELNERPLYEIVKLIKESKKVSCNSDYVRNFMDTLETDLEIETEFNIEGSGAFTTFTDWRHLEFYENVDFGVKEIVNVVPIPSDMFGCVDLCIFSALGNFDSSMEGGVGIFVSLPAPALLTFKEEMEALTLLI 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g01238 461 Gene3D - 234 454 IPR023213 -
Viun6g01238 461 PANTHER ACYL TRANSFERASE 4 8 455 - -
Viun6g01238 461 Gene3D - 5 222 IPR023213 -
Viun6g01238 461 Pfam Transferase family 13 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g01238 Viun-Chr6 21538377 21539762 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g01238 9 408 Monolignol Biosynthesis Gene Families AT5G48930 28.058 2.01e-36 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g01238 K20240 - gmx:100801843 501.516