Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g01237 ATGTCTTCCACTACTCTCCAATGGCTAAGCCTTGTTGGCACCATTTGGCTCCAAGCCATAATTGGCACAAACACTAATTTCCCTGCTTATTCTTCTCAGCTGAAGCAACTTCTTTCCATTTCCCAAGTCCAACTCAATAACCTTGCTTTTGCCTCTGATGCAGGCAAGCTTTTTGGCTGGTTTTCTGGCCTTGCTTCTATATACCTCCCTCTTTGGCTTGTCCTCTTGACTGGTTCAACTCTTGGCTTAATTGGCTATGGTGTACAATATCTCTTCATAACCAAACAGATTTCATCTTTGTCCTATTGGCATGTGTTCTTGCTAACTTTTCTTGCTGGCAATAGTATTTGTTGGATCAACACTGTGTGCTATGTTGTCACCATAAGGAACTTTCTATCAGATCGCCAAGTTGCTGTCGGAATAACAACTAGCTACCAAGGACTCAGTGCAAAGATTTACGCCAACATTGTTGATGCTGTTTCTCCTCACAACAAGGCCAAAACATTTCTCTTCCTGAACTCTCTTTTACCTGTGATAGTTGGGCTAGTAGCAGCTCCTATGGTCAGAGAATTTGATGCCGCAAGTCCTAAGCACACGCGTGTTGGGTTTGCTGTGATGTTTGTCATAACAATTTTCACTGGAATATATGCTGTGTTGAGCAGCTTGCAATTTGTCACAAGCAAAGCATCTTCAATAGATATCATGACTGGTATCTTAGTGTCCCTTCTGTTGCCTCTTCTGGTTCCACTTTCAGTGAAGATCAAGGAACTGCAGGATAATAGAGAGAACTTGAGAATCTACCATTTTACTATGGAGGAGAATAACAGTGAAGAGAGGGTGGAGAATGAGGTGAAAGAGGGTGAAGTTGAAGAAGAGATTGGTATCATAGAAGAAGTTGGAGTGAAGTTGATGGTTAGAAGAATAAACTTCTGGTTATATTTTTTTGTGTACTATTTTGGTGCAACAGTTGGTTTAGTTTATCTTAATAACCTGGGACAAATAGCTGAATCTCGGGGTTGCTCCAATACTTCATCTTTGGTGTCTCTGTCATCATCGTTTGGGTTCTTTGGCCGTCTCATGCCATCTCTTATGTACTACTTCTACAGGGGAAAGGGTCGAATTTCAAGACCTGGTTCACTGTTGGCAGTGATGGTTCCAACATCAGGAGCGTTTTTTTTGCTTCTCAACAGAACTGATCTTGCTCTTTATGTTAGCAGTGCAGTGATTGGAGTGTGTACTGGAGCAATCACTTCCATTGCTGTTTCCACAACCACTGAGCTGTTTGGTACAAAGCATTTCTCAGTGAACCATAACGTGGTGGTGGCCAACATTCCTATGGGATCCTTCATATTTGGCTATTCAGCTGCACTTGTTTACCGTGGTGAAGGACATGGAAGCTATGAGCAAGGGCAATGCATGGGCATGGAATGCTACAGAAACACTTTTATCATCTGGGGTTCCTTGTGTTTCTTTGGAACTCTTCTGGCTTTGGTTCTTCATGTTAGAACTCGCAAGTTTTACTCACAAAAACAATAG 1536 0.4212 MSSTTLQWLSLVGTIWLQAIIGTNTNFPAYSSQLKQLLSISQVQLNNLAFASDAGKLFGWFSGLASIYLPLWLVLLTGSTLGLIGYGVQYLFITKQISSLSYWHVFLLTFLAGNSICWINTVCYVVTIRNFLSDRQVAVGITTSYQGLSAKIYANIVDAVSPHNKAKTFLFLNSLLPVIVGLVAAPMVREFDAASPKHTRVGFAVMFVITIFTGIYAVLSSLQFVTSKASSIDIMTGILVSLLLPLLVPLSVKIKELQDNRENLRIYHFTMEENNSEERVENEVKEGEVEEEIGIIEEVGVKLMVRRINFWLYFFVYYFGATVGLVYLNNLGQIAESRGCSNTSSLVSLSSSFGFFGRLMPSLMYYFYRGKGRISRPGSLLAVMVPTSGAFFLLLNRTDLALYVSSAVIGVCTGAITSIAVSTTTELFGTKHFSVNHNVVVANIPMGSFIFGYSAALVYRGEGHGSYEQGQCMGMECYRNTFIIWGSLCFFGTLLALVLHVRTRKFYSQKQ 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g01237 511 CDD MFS_Mch1p_like 6 493 - -
Viun6g01237 511 Pfam Nodulin-like 7 249 IPR010658 -
Viun6g01237 511 SUPERFAMILY MFS general substrate transporter 11 505 IPR036259 -
Viun6g01237 511 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 8 508 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g01237 Viun-Chr6 21483465 21485671 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g01237 1 510 Nodulin-like Gene Family AT2G30300 50.192 7.97e-155 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g01237 - - gmx:100800763 814.298