Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g01226 ATGGACACTGAAGCTGACTCAAGAGATACTTCTCTCATTCTGCTCAAGCAAGGAGCTGAAGCTAGGGTTTTTGAGTCTTCTTTTGTGGGAAGGAAATCCGTTGTCAAGGAACGCTTCTCAAAGAAGTACAGGCATCCAGCTTTGGATTCAAAATTGACCCTCAAGCGCTTAAATGCGGAGGCTAGGTGCATGACCAAAGCAAGGCGACTTGGGGTTTGTACTCCTGTGCTGTATGCTGTGGATCATGTGTTGCACACTTTAACATTTGAATATGTTACTGGCCCTTCAGTCAAAGATGTGTTTCTTGAATTCGGGGCACTTGGGACTGATAAAGAGTGGCTGGATAATATTGCATCCCAAATTGGTGATGCAATTGGGAAGTTACATGATGGTGGTCTTATTCATGGTGATTTAACAACATCAAACATGTTACTGAAGAGTGATACCAAGCAGTTGGTGAGTTCATTCATGTCTCAGGTTCTTATTGATTTTGGTCTGAGCTTCACTTCAACTCTTCCAGAAGATAAAGCTGTTGATTTGTATGTTCTGGAAAGATCTATTATTTCAATGCATTCATCATGTGGGAATGTGATGGATCAAATTCTTGCTGCATACAGAAAGTCATCAAAACAGTGGTCAACCACATTAAACAAGCTAGCACAAGTGCGACAAAGAGGGCGGAAGAGGACCATGGTTGGATGA 702 0.4217 MDTEADSRDTSLILLKQGAEARVFESSFVGRKSVVKERFSKKYRHPALDSKLTLKRLNAEARCMTKARRLGVCTPVLYAVDHVLHTLTFEYVTGPSVKDVFLEFGALGTDKEWLDNIASQIGDAIGKLHDGGLIHGDLTTSNMLLKSDTKQLVSSFMSQVLIDFGLSFTSTLPEDKAVDLYVLERSIISMHSSCGNVMDQILAAYRKSSKQWSTTLNKLAQVRQRGRKRTMVG 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g01226 233 ProSiteProfiles Protein kinase domain profile. 9 233 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun6g01226 233 Pfam Protein kinase domain 41 168 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun6g01226 233 SUPERFAMILY Protein kinase-like (PK-like) 14 182 IPR011009 -
Viun6g01226 233 FunFam Protein kinase superfamily protein 107 230 - -
Viun6g01226 233 Gene3D Transferase(Phosphotransferase) domain 1 109 230 - -
Viun6g01226 233 NCBIfam KEOPS complex kinase/ATPase Bud32 18 227 IPR022495 GO:0004674
Viun6g01226 233 Gene3D Phosphorylase Kinase; domain 1 20 92 - -
Viun6g01226 233 ProSitePatterns Tyrosine protein kinases specific active-site signature. 133 145 IPR008266 GO:0004672|GO:0006468
Viun6g01226 233 FunFam TP53-regulating kinase isoform X1 20 92 - -
Viun6g01226 233 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 5 233 IPR022495 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g01226 Viun-Chr6 21459448 21462173 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Cr-3 Viun6g01226 Pkinase 1.5e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g01226 K08851 - gmx:100782376 402.905