Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g01223 ATGAAACCAAAGGAGGGTTACACAATCAATTCTACCTATATATACATATTGATACATGTTCTTATATCCTCACATCACATCTCAGTTTTTTACCCATTAAATTCCATGGAAAACATGAAGACACCCTTTGTCCTTGATATGAAGGATGTTGTAATAGTTAAACCCTCCAAGCCCACACCATCTGAACTTCTTTCTCTGTCCACCATTGACAGTGATCCTGTTCTCAACATTCTGTGTCAGACCATTTATGTTTACAAAGCAAATCTTGATTCCCCAAATGGCCAACCAGATCCTGCTCAGGTGATAAAAGAAGCCCTCTCAAAGGTTTTAGTTTACTATTATCCTCTTGCTGGGAAGATAGTAACATGTGATGATGGAAAACTTGGAATCAACTGCAATGCTGATGGAGTTCCATTCTTGGAGGCAACTGCTAACTGTGAACTCTCTTCTCTTCACTATCTAGAAGGGATCGATGTTCCAACTGCACAGAAATTGGTCATTAATAATGATAATAAGCCTTCTCAAGATGAAAACCACGCCTTGGCTTTTATGGTGACCAAGTTTCTCTGCGGGGGTTTCACTATTGGCATGGGGTTGTCACACAGTGTTTGTGATGGGTTTGGTGCATCTCAGTTCTTCAGAGCCTTGGCTGAGCTTGCATGTGGAAAAAGTGAGCCCTCAGTGAAACCTGTGTGGGAGAGGGAGAGACTAGTGGGGACACTTCTTAAGGAACCACTCCAATTTCCCATTGATGAGACTTCAAGGGCAGTTTCACCATTTTGGCCAAGTGATGAGATTTCACATGAATGCTTTAACTTCAATGCTAAGAGCATAGAAAGACTCAAAATGGAGCTGATGAAGGAAAGTGATGATGTGAAGGAAAGCTTGACAACTGTTGAAACACTTGGTGCCTATGTTTGGAGGTCAAGGGCTAGAGCTTTGGAATTGAACTCTGATGGGAAAACTATGCTGTGTTTAGCAGTAGGGGTGAGACGGCTGTTGGATCCACCCTTGCCTGAAGGGTATTATGGGAATGCTTTTGTGGGTTCATATGTGGTGCAAACAGTGAAAGAACTTGATGAAAGACCACTCTCAGAGATTGTGAAGCTCATCAAAGAGAGCAAAAAGCTTCCTTCCAATAATGAGTATATCAGAAACACAATAAACATGTTAGAGACAGTGAGACAGAGGAACATAAGGATTGAAGGAACATGTGCTTCTGTGGTGTTAACAGATTGGAGGCAGCTGAGTTTGCTGGAAGAAGTGGATTTTGGATGGAAGGGTTCAGTGAATATAATACCAGTTCCATGGAATATGTTAGGGTATGTGGACTTGTGCCTTTTCTTGCCTCCTAGTAACTTGGATCCTTCATTGAAAGCAGGAGTTAGGGTCTTTGTTTCCCTCCCCAAAGCTTCCATGCCCAAGTTTAGGGAAGAGATGGAGGCACTAAAGCTTACGAGAGCTGATGAGAATAGCACCTTGCAATGA 1488 0.4227 MKPKEGYTINSTYIYILIHVLISSHHISVFYPLNSMENMKTPFVLDMKDVVIVKPSKPTPSELLSLSTIDSDPVLNILCQTIYVYKANLDSPNGQPDPAQVIKEALSKVLVYYYPLAGKIVTCDDGKLGINCNADGVPFLEATANCELSSLHYLEGIDVPTAQKLVINNDNKPSQDENHALAFMVTKFLCGGFTIGMGLSHSVCDGFGASQFFRALAELACGKSEPSVKPVWERERLVGTLLKEPLQFPIDETSRAVSPFWPSDEISHECFNFNAKSIERLKMELMKESDDVKESLTTVETLGAYVWRSRARALELNSDGKTMLCLAVGVRRLLDPPLPEGYYGNAFVGSYVVQTVKELDERPLSEIVKLIKESKKLPSNNEYIRNTINMLETVRQRNIRIEGTCASVVLTDWRQLSLLEEVDFGWKGSVNIIPVPWNMLGYVDLCLFLPPSNLDPSLKAGVRVFVSLPKASMPKFREEMEALKLTRADENSTLQ 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g01223 495 Gene3D - 43 245 IPR023213 -
Viun6g01223 495 Gene3D - 255 480 IPR023213 -
Viun6g01223 495 Pfam Transferase family 51 482 - -
Viun6g01223 495 PANTHER ACYL TRANSFERASE 4 43 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g01223 Viun-Chr6 21456174 21457925 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g01223 45 462 Monolignol Biosynthesis Gene Families AT5G48930 26.256 4.45e-36 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g01223 K20240 - gmx:100801843 818.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun6g01223 6 21456174 21457925 Viun6g01223 6 21456174 21457925 ECH